The following commit has been merged in the master branch: commit bc09395741499c304f86c3f6c816527fd898b028 Author: Andreas Tille <ti...@debian.org> Date: Mon Oct 19 17:02:55 2015 +0200
jmodeltest packaging will be commited to Git diff --git a/tasks/bio b/tasks/bio index 1f781eb..2f38ac8 100644 --- a/tasks/bio +++ b/tasks/bio @@ -509,6 +509,8 @@ Depends: jaligner Depends: jbrowse +Depends: jmodeltest + Depends: kempbasu Depends: kissplice diff --git a/tasks/bio-phylogeny b/tasks/bio-phylogeny index 7e1c138..d7618e0 100644 --- a/tasks/bio-phylogeny +++ b/tasks/bio-phylogeny @@ -151,17 +151,6 @@ Pkg-Description: Bayesian sampling of phylogenetic trees from molecular data bayesian sampling of phylogenetic trees from these data. Depends: jmodeltest -Homepage: http://darwin.uvigo.es/software/jmodeltest.html -License: GPL -Pkg-Description: phylogenetic model averaging - JModelTest is a tool to carry out statistical selection of best-fit - models of nucleotide substitution. It implements five different model - selection strategies: hierarchical and dynamical likelihood ratio tests - (hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC), - and a decision theory method (DT). It also provides estimates of model - selection uncertainty, parameter importances and model-averaged - parameter estimates, including model-averaged phylogenies. Please note - that the DT weights are very gross Depends: forester -- Debian Med metapackages _______________________________________________ Blends-commit mailing list Blends-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/blends-commit