And, here it is! https://chemapps.stolaf.edu/olcc/examples/js/CDK_image_JS.htm
Very slick! All suggestions welcome at http://olcc.ccce.divched.org/content/prog-access by the way... Bob On Tue, Aug 30, 2016 at 11:09 PM, Robert Hanson <hans...@stolaf.edu> wrote: > No, I had not seen that. Fantastic! Just what I need. I will clone this > for the OLCC course right now! > > On Tue, Aug 30, 2016 at 7:22 AM, Egon Willighagen < > egon.willigha...@gmail.com> wrote: > >> On Tue, Aug 30, 2016 at 2:16 PM, Robert Hanson <hans...@stolaf.edu> >> wrote: >> > Maybe some of you want to help! >> >> Want is one thing... actually have time (read: some good reason to >> spend project hours on it...), that's another... >> >> Bob, you may also be interested in John May's 2D depiction, but I >> guess you already have seen that: >> https://cdkdepict-openchem.rhcloud.com/depict.html >> >> I may be able to do some proofreading, which I did a bit in the past >> too... Robert Belford tried to get my support a long time ago, and it >> has my full moral support, but I don't have any cheminformatics >> courses I teach right now, so no course material development time :( >> >> Egon >> >> > On Tue, Aug 30, 2016 at 7:13 AM, Egon Willighagen < >> egon.willigha...@gmail.com> wrote: >> >> >> >> >> >> Rajarshi, Ola, >> >> >> >> where is the code base? Then I can look at updating the code. The QSAR >> stack has not changed a lot, neither has the SMILES parsing API. I think I >> can fix it without much trouble, if there is a git repository and build >> instructions... >> >> >> >> Then Ola and I can look at updating the instance in two weeks when I'm >> visiting his lab. >> >> >> >> Egon >> >> >> >> >> >> On Tue, Aug 30, 2016 at 10:21 AM, Ola Spjuth <ola.spj...@farmbio.uu.se> >> wrote: >> >>> >> >>> Hi, >> >>> >> >>> Yes, I can confirm that we have been hosting this for some time. We >> used it in the past, but I dot think we are using it anymore. I would be >> happy to continue hosting an updated version. >> >>> >> >>> Ola >> >>> >> >>> >> >>> On 30 aug. 2016, at 03:04, Rajarshi Guha <rajarshi.g...@gmail.com> >> wrote: >> >>> >> >>> I think Ola Spjuth was/is hosting this. >> >>> >> >>> The code is a set of REST services described at http://rest.rguha.net >> - it hasn't been updated in many years. The JAR file should run and the >> code should compile (I think it includes the relevant CDK dependencies). >> >>> >> >>> But it's many version behind the latest CDK, so I would'nt suggest >> using this for production >> >>> >> >>> On Mon, Aug 29, 2016 at 7:48 PM, Robert Hanson <hans...@stolaf.edu> >> wrote: >> >>>> >> >>>> Does anyone know whom to contact in relation to this site? >> >>>> >> >>>> Cross-Origin Request Blocked: The Same Origin Policy disallows >> reading the remote resource at http://ws1.bmc.uu.se:8182/cdk/ >> descriptor/org.openscience.cdk.qsar.descriptors.molecular.Ru >> leOfFiveDescriptor/CCCOCOC. (Reason: CORS header >> 'Access-Control-Allow-Origin' missing). >> >>>> >> >>>> It looks like a great site, but (a) I can't find any documentation >> on it and (b) it isn't accessible by AJAX. >> >>>> >> >>>> Bob Hanson >> >>>> >> >>>> -- >> >>>> Robert M. Hanson >> >>>> Larson-Anderson Professor of Chemistry >> >>>> St. Olaf College >> >>>> Northfield, MN >> >>>> http://www.stolaf.edu/people/hansonr >> >>>> >> >>>> >> >>>> If nature does not answer first what we want, >> >>>> it is better to take what answer we get. >> >>>> >> >>>> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> >>>> >> >>>> >> >>>> ------------------------------------------------------------ >> ------------------ >> >>>> >> >>>> _______________________________________________ >> >>>> Blueobelisk-discuss mailing list >> >>>> Blueobelisk-discuss@lists.sourceforge.net >> >>>> https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss >> >>>> >> >>> >> >>> >> >>> >> >>> -- >> >>> Rajarshi Guha | http://blog.rguha.net >> >>> NIH Center for Advancing Translational Science >> >>> ------------------------------------------------------------ >> ------------------ >> >>> _______________________________________________ >> >>> Blueobelisk-discuss mailing list >> >>> Blueobelisk-discuss@lists.sourceforge.net >> >>> https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss >> >>> >> >>> >> >>> >> >>> ------------------------------------------------------------ >> ------------------ >> >>> >> >>> _______________________________________________ >> >>> Blueobelisk-discuss mailing list >> >>> Blueobelisk-discuss@lists.sourceforge.net >> >>> https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss >> >>> >> >> >> >> >> >> >> >> -- >> >> E.L. Willighagen >> >> Department of Bioinformatics - BiGCaT >> >> Maastricht University (http://www.bigcat.unimaas.nl/) >> >> Homepage: http://egonw.github.com/ >> >> LinkedIn: http://se.linkedin.com/in/egonw >> >> Blog: http://chem-bla-ics.blogspot.com/ >> >> PubList: http://www.citeulike.org/user/egonw/tag/papers >> >> ORCID: 0000-0001-7542-0286 >> >> ImpactStory: https://impactstory.org/EgonWillighagen >> >> >> >> ------------------------------------------------------------ >> ------------------ >> >> >> >> _______________________________________________ >> >> Blueobelisk-discuss mailing list >> >> Blueobelisk-discuss@lists.sourceforge.net >> >> https://lists.sourceforge.net/lists/listinfo/blueobelisk-discuss >> >> >> > >> > >> > >> > -- >> > Robert M. Hanson >> > Larson-Anderson Professor of Chemistry >> > St. Olaf College >> > Northfield, MN >> > http://www.stolaf.edu/people/hansonr >> > >> > >> > If nature does not answer first what we want, >> > it is better to take what answer we get. >> > >> > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> > >> >> >> >> -- >> E.L. Willighagen >> Department of Bioinformatics - BiGCaT >> Maastricht University (http://www.bigcat.unimaas.nl/) >> Homepage: http://egonw.github.com/ >> LinkedIn: http://se.linkedin.com/in/egonw >> Blog: http://chem-bla-ics.blogspot.com/ >> PubList: http://www.citeulike.org/user/egonw/tag/papers >> ORCID: 0000-0001-7542-0286 >> ImpactStory: https://impactstory.org/EgonWillighagen >> > > > > -- > Robert M. Hanson > Larson-Anderson Professor of Chemistry > St. Olaf College > Northfield, MN > http://www.stolaf.edu/people/hansonr > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > -- Robert M. Hanson Larson-Anderson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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