We had an issue with block-cache growing beyond configured size & reducing
very rarely. Describing the sequence of events

   1. Shard receives incoming mutations, adds it to Index & triggers
   background merge.
   2. Merge produces new-set of files. We have write-thru cache enabled &
   adds new files to block-cache..
   3. Shard goes silent & doesn't receive any mutation for many minutes all
   together
   4. Since we perform commit only upon receiving mutations, the
   older-files are not evicted from block-cache..
   5. Problem is exacerbated with KeepNLastCommit policy, where even after
   commit, unused files are not evicted from block-cache..


We are planning to patch up SharedMergeScheduler by refreshing IndexReader
when a merge completes & then delete merged files from block-cache. This
way, I believe block-cache can be reigned in whenever it exceeds capacity,
irrespective of Commit-Policy used

Do let know if this is fine...

On Thu, Jun 16, 2016 at 4:33 PM, Ravikumar Govindarajan <
[email protected]> wrote:

>  I didn't fully understand the underlying Lucene reader, writer,
>> open, close semantics
>
>
> I too don't know the correct behavior. Lucene code is incredibly hairy to
> follow... :)
>
> Have pinged lucene mailing list. Hope someone replies...
>
> On Tue, Jun 7, 2016 at 4:46 PM, Aaron McCurry <[email protected]> wrote:
>
>> On Wed, Jun 1, 2016 at 7:34 AM, Ravikumar Govindarajan <
>> [email protected]> wrote:
>>
>> > Just one more observation here...
>> >
>> > Even if readerPooling is set to true, lucene has 2 readers (One for
>> search
>> > & one updates/deletes)
>> >
>> > But the reader for updates/deletes is not opened/closed for every commit
>> > call which is the default behavior as of today. It is opened only once
>> > (During first update/delete call)
>> >
>>
>> I will take a closer look at the code for this one.  Likely when I wrote
>> this code I didn't fully understand the underlying Lucene reader, writer,
>> open, close semantics.  Thank you for pointing this out!
>>
>> Aaron
>>
>>
>> >
>> > On Wed, Jun 1, 2016 at 3:10 PM, Ravikumar Govindarajan <
>> > [email protected]> wrote:
>> >
>> > > In newer versions of the code there are multiple streams involved.
>> One
>> > for
>> > >> each open file handle plus if a sequential read is detected a new
>> stream
>> > >> is
>> > >> created for the instance for better performance
>> > >
>> > >
>> > > Great. We just patched up our Blur version with this code.
>> > >
>> > > While I was digging at the reader-closed issue, was quite surprised to
>> > > observe the following behavior
>> > >
>> > >    - Issue a commit
>> > >    - Lucene opens a new reader via IndexWriter. (Doesn't re-use our
>> > >    already opened DirectoryReader)
>> > >    - Processes all updates/deletes/merges
>> > >    - Closes the new reader
>> > >    - Complete commit
>> > >
>> > > For a big index & lots of commits, opening a new-reader for every
>> commit
>> > > is prohibitively expensive.
>> > >
>> > >
>> > > Here is the JIRA for it...
>> > > https://issues.apache.org/jira/browse/LUCENE-2297
>> > >
>> > > All we need to do is just set "readerPooling=true" in
>> IndexWriterConfig
>> > > class
>> > >
>> > > Please do explore this option when you find time.
>> > >
>> > > --
>> > > Ravi
>> > >
>> > >
>> > >
>> > > On Tue, May 24, 2016 at 7:48 PM, Aaron McCurry <[email protected]>
>> > wrote:
>> > >
>> > >> On Tue, May 24, 2016 at 6:06 AM, Ravikumar Govindarajan <
>> > >> [email protected]> wrote:
>> > >>
>> > >> > We have solved it temporarily by using a KeepLastTwoCommits del
>> > policy.
>> > >> We
>> > >> > don't get these exceptions now!!!
>> > >> >
>> > >>
>> > >> Great!
>> > >>
>> > >>
>> > >> >
>> > >> > Btw, I see that pread calls in FSDataInputStream.java are
>> > synchronized.
>> > >> Is
>> > >> > it possible that merge DFS read calls could potentially block
>> search
>> > DFS
>> > >> > read calls?
>> > >> >
>> > >>
>> > >> Yes.
>> > >>
>> > >>
>> > >> >
>> > >> > Would it be a good idea to have 2 DFSInputStreams for every file,
>> one
>> > >> for
>> > >> > merge & another for search?
>> > >> >
>> > >>
>> > >> In newer versions of the code there are multiple streams involved.
>> One
>> > >> for
>> > >> each open file handle plus if a sequential read is detected a new
>> stream
>> > >> is
>> > >> created for the instance for better performance.  Checkout the
>> > >> HdfsDirectory class.
>> > >>
>> > >> Aaron
>> > >>
>> > >>
>> > >> >
>> > >> > On Tue, May 10, 2016 at 7:43 PM, Ravikumar Govindarajan <
>> > >> > [email protected]> wrote:
>> > >> >
>> > >> > > Sorry, I mis-understood the code.
>> > >> > > I see that it has 2 locks IndexRefreshWriteLock &
>> > >> IndexRefreshReadLock.
>> > >> > > They look to be separate
>> > >> > >
>> > >> > > On Tue, May 10, 2016 at 7:16 PM, Ravikumar Govindarajan <
>> > >> > > [email protected]> wrote:
>> > >> > >
>> > >> > >> Thanks a lot Aaron.
>> > >> > >>
>> > >> > >> I guess we took a commit of 0.2.2 that doesn't have the
>> > >> > >> IndexRefreshWriteLock (IRWL). It looks like it co-ordinates
>> between
>> > >> > >> searches & incoming mutation commits. If so, then it will likely
>> > >> solve
>> > >> > the
>> > >> > >> first issue for us (AlreadyClosedException)
>> > >> > >>
>> > >> > >>
>> > >> > >> Can you recollect if that was the reason IRWL was introduced?
>> > >> > >>
>> > >> > >> On Tue, May 10, 2016 at 6:40 PM, Aaron McCurry <
>> [email protected]
>> > >
>> > >> > >> wrote:
>> > >> > >>
>> > >> > >>> On Tue, May 10, 2016 at 2:30 AM, Ravikumar Govindarajan <
>> > >> > >>> [email protected]> wrote:
>> > >> > >>>
>> > >> > >>> > Actually there are 2 issues...
>> > >> > >>> >
>> > >> > >>> > 1. IndexReaderClosedException
>> > >> > >>> > 2. HDFS Stream Closed
>> > >> > >>> >
>> > >> > >>>
>> > >> > >>> Likely when the index is closed it closes the underlying
>> > >> indexinputs as
>> > >> > >>> well causing the HDFS Stream closed exception.
>> > >> > >>>
>> > >> > >>>
>> > >> > >>> >
>> > >> > >>> > Merge completion results in File Deletion & ultimately HDFS
>> > Stream
>> > >> > >>> Closed
>> > >> > >>> > during Search....
>> > >> > >>> >
>> > >> > >>> > I use IndexFileDeleter with KeepOnlyLastCommitDeletionPolicy.
>> > This
>> > >> > >>> blindly
>> > >> > >>> > deletes the file, without bothering to cross-check
>> > >> > >>> IndexReader.RefCount >
>> > >> > >>> > 0.
>> > >> > >>> >
>> > >> > >>>
>> > >> > >>> Hmm.  You can see here:
>> > >> > >>>
>> > >> > >>>
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> https://github.com/apache/incubator-blur/blob/release-0.2.2-incubating/blur-core/src/main/java/org/apache/blur/manager/writer/BlurIndexSimpleWriter.java#L303
>> > >> > >>>
>> > >> > >>> That once the new index is available it is swapped into the
>> index
>> > >> ref
>> > >> > >>> object and the old one is sent to the index closer.  Once the
>> ref
>> > to
>> > >> > the
>> > >> > >>> index are low enough it closes the index.  Or at least it
>> should.
>> > >> > >>>
>> > >> > >>> I will continue looking into the problem but I don't have a
>> > solution
>> > >> > for
>> > >> > >>> you yet.
>> > >> > >>>
>> > >> > >>> Aaron
>> > >> > >>>
>> > >> > >>>
>> > >> > >>>
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> > *Exception(message:Unknown error during rewrite,
>> > >> > >>> > stackTraceStr:java.io.IOException: Stream closed*
>> > >> > >>> > at
>> > >> > >>>
>> > >> org.apache.hadoop.hdfs.DFSInputStream.pread(DFSInputStream.java:1385)
>> > >> > >>> > at
>> > >> >
>> org.apache.hadoop.hdfs.DFSInputStream.read(DFSInputStream.java:1374)
>> > >> > >>> > at
>> > >> > >>>
>> > >>
>> org.apache.hadoop.fs.FSDataInputStream.read(FSDataInputStream.java:89)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.hdfs.HdfsIndexInput.readInternal(HdfsIndexInput.java:62)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.buffer.ReusedBufferedIndexInput.readBytes(ReusedBufferedIndexInput.java:167)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.buffer.ReusedBufferedIndexInput.readBytes(ReusedBufferedIndexInput.java:122)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.hdfs.MmapCacheIndexInput.readAndcache(MmapCacheIndexInput.java:24)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.blockcache_v2.CacheIndexInput.fillNormally(CacheIndexInput.java:354)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.blockcache_v2.CacheIndexInput.fill(CacheIndexInput.java:379)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.blockcache_v2.CacheIndexInput.tryToFill(CacheIndexInput.java:297)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.store.blockcache_v2.CacheIndexInput.readByte(CacheIndexInput.java:151)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.lucene.warmup.TraceableIndexInput.readByte(TraceableIndexInput.java:62)
>> > >> > >>> > at
>> > org.apache.lucene.store.DataInput.readVInt(DataInput.java:108)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.codecs.BlockTreeTermsReader$FieldReader$SegmentTermsEnum$Frame.loadBlock(BlockTreeTermsReader.java:2366)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.codecs.BlockTreeTermsReader$FieldReader$SegmentTermsEnum.seekCeil(BlockTreeTermsReader.java:1949)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.index.ExitableReader$ExitableTermsEnum.seekCeil(ExitableReader.java:250)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.index.FilteredTermsEnum.next(FilteredTermsEnum.java:225)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.search.TermCollectingRewrite.collectTerms(TermCollectingRewrite.java:78)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.search.ConstantScoreAutoRewrite.rewrite(ConstantScoreAutoRewrite.java:95)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.search.MultiTermQuery$ConstantScoreAutoRewrite.rewrite(MultiTermQuery.java:220)
>> > >> > >>> > at
>> > >> > >>>
>> > >> >
>> > org.apache.lucene.search.MultiTermQuery.rewrite(MultiTermQuery.java:288)
>> > >> > >>> > at
>> > >> >
>> org.apache.lucene.search.BooleanQuery.rewrite(BooleanQuery.java:412)
>> > >> > >>> > at
>> > >> >
>> org.apache.lucene.search.BooleanQuery.rewrite(BooleanQuery.java:412)
>> > >> > >>> > at
>> > >> >
>> org.apache.lucene.search.BooleanQuery.rewrite(BooleanQuery.java:412)
>> > >> > >>> > at
>> > >> > >>> >
>> > >> > >>> > On Mon, May 9, 2016 at 4:42 PM, Ravikumar Govindarajan <
>> > >> > >>> > [email protected]> wrote:
>> > >> > >>> >
>> > >> > >>> > > One extra info we gleaned from the logs...
>> > >> > >>> > >
>> > >> > >>> > > 1. Merge Starts & is about to complete
>> > >> > >>> > > 2. Searcher is opened
>> > >> > >>> > > 3. Merge Completes
>> > >> > >>> > > 4. Ref-count drops to 0 in IndexReader
>> > >> > >>> > > 5. IndexReader closed while Searcher is still open
>> > >> > >>> > >
>> > >> > >>> > > This seems to be the main pattern for causing the Exception
>> > >> > >>> > >
>> > >> > >>> > > --
>> > >> > >>> > > Ravi
>> > >> > >>> > >
>> > >> > >>> > > On Mon, May 9, 2016 at 3:08 PM, Ravikumar Govindarajan <
>> > >> > >>> > > [email protected]> wrote:
>> > >> > >>> > >
>> > >> > >>> > >> Thanks Aaron...
>> > >> > >>> > >>
>> > >> > >>> > >> Just a quick question. Lucene itself has ref-counting to
>> > close
>> > >> > it's
>> > >> > >>> > >> readers no? Or Blur has it's own logic to handle it?
>> > >> > >>> > >>
>> > >> > >>> > >> --
>> > >> > >>> > >> Ravi
>> > >> > >>> > >>
>> > >> > >>> > >> On Fri, May 6, 2016 at 7:56 PM, Aaron McCurry <
>> > >> [email protected]
>> > >> > >
>> > >> > >>> > wrote:
>> > >> > >>> > >>
>> > >> > >>> > >>> Likely yes.  If have a few minutes this weekend I can
>> look
>> > >> > through
>> > >> > >>> that
>> > >> > >>> > >>> version and see if I can point you in the right
>> direction.
>> > >> > >>> > >>>
>> > >> > >>> > >>> On Fri, May 6, 2016 at 8:46 AM, Ravikumar Govindarajan <
>> > >> > >>> > >>> [email protected]> wrote:
>> > >> > >>> > >>>
>> > >> > >>> > >>> > Sometimes during an ongoing search we receive an
>> > >> > >>> > >>> > IndexReaderClosedException...
>> > >> > >>> > >>> >
>> > >> > >>> > >>> > We are on an older version of Blur (0.2.2). Has this
>> been
>> > >> fixed
>> > >> > >>> in
>> > >> > >>> > >>> newer
>> > >> > >>> > >>> > versions or we have been using it wrongly?
>> > >> > >>> > >>> >
>> > >> > >>> > >>> >
>> > >> *stackTraceStr:org.apache.lucene.store.AlreadyClosedException:
>> > >> > >>> this
>> > >> > >>> > >>> > IndexReader cannot be used anymore as one of its child
>> > >> readers
>> > >> > >>> was
>> > >> > >>> > >>> closed*
>> > >> > >>> > >>> > at
>> > >> > >>> >
>> > >> org.apache.lucene.index.IndexReader.ensureOpen(IndexReader.java:257)
>> > >> > >>> > >>> > at
>> > >> > >>> > >>> >
>> > >> > >>> > >>> >
>> > >> > >>> > >>>
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.index.FilterAtomicReader.fields(FilterAtomicReader.java:380)
>> > >> > >>> > >>> > at
>> > >> > >>> > >>> >
>> > >> > >>> > >>> >
>> > >> > >>> > >>>
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.blur.index.ExitableReader$ExitableFilterAtomicReader.fields(ExitableReader.java:81)
>> > >> > >>> > >>> > at
>> > >> > >>> > >>> >
>> > >> > >>> > >>> >
>> > >> > >>> > >>>
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.search.TermCollectingRewrite.collectTerms(TermCollectingRewrite.java:52)
>> > >> > >>> > >>> > at
>> > >> > >>> > >>> >
>> > >> > >>> > >>> >
>> > >> > >>> > >>>
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.search.ConstantScoreAutoRewrite.rewrite(ConstantScoreAutoRewrite.java:95)
>> > >> > >>> > >>> > at
>> > >> > >>> > >>> >
>> > >> > >>> > >>> >
>> > >> > >>> > >>>
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > >>
>> >
>> org.apache.lucene.search.MultiTermQuery$ConstantScoreAutoRewrite.rewrite(MultiTermQuery.java:220)
>> > >> > >>> > >>> > at
>> > >> > >>> > >>>
>> > >> > >>> >
>> > >> > >>>
>> > >> >
>> > org.apache.lucene.search.MultiTermQuery.rewrite(MultiTermQuery.java:288)
>> > >> > >>> > >>> > at
>> > >> > >>> >
>> > >> org.apache.lucene.search.BooleanQuery.rewrite(BooleanQuery.java:412)
>> > >> > >>> > >>> >
>> > >> > >>> > >>>
>> > >> > >>> > >>
>> > >> > >>> > >>
>> > >> > >>> > >
>> > >> > >>> >
>> > >> > >>>
>> > >> > >>
>> > >> > >>
>> > >> > >
>> > >> >
>> > >>
>> > >
>> > >
>> >
>>
>
>

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