It seems python-shapely assumes musl libc, because the store path of
glibc was missing in one place. Now the Test suite runs without failure.
Malte
>From a320ab014d60f5401f409eb37ccb16aa23c32cf1 Mon Sep 17 00:00:00 2001
From: Malte Frank Gerdes <malte.f.ger...@gmail.com>
Date: Thu, 8 Oct 2020 20:20:12 +0200
Subject: [PATCH] gnu: python-shapely: Update to 1.7.1.
* gnu/packages/python-xyz.scm (python-shapely): Update to 1.7.1.
---
gnu/packages/python-xyz.scm | 9 ++++++---
1 file changed, 6 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 459526941b..fa4a4f4954 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -507,14 +507,14 @@ pidof, tty, taskset, pmap.")
(define-public python-shapely
(package
(name "python-shapely")
- (version "1.6.4.post2")
+ (version "1.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Shapely" version))
(sha256
(base32
- "03r42fmd9alp6r3q95ad6rldq2f7n1wimrw53zy5kpn33yv7pf64"))))
+ "0adiz4jwmwxk7k1awqifb1a9bj5x4nx4gglb5dz9liam21674h8n"))))
(build-system python-build-system)
(native-inputs
`(("python-cython" ,python-cython)
@@ -533,11 +533,14 @@ pidof, tty, taskset, pmap.")
(let ((geos (assoc-ref inputs "geos"))
(glibc (assoc-ref inputs ,(if (%current-target-system)
"cross-libc" "libc"))))
- (substitute* "shapely/geos.py"
+ (substitute* '("shapely/geos.py" "shapely/_buildcfg.py")
(("_lgeos = load_dll\\('geos_c', fallbacks=.*\\)")
(string-append "_lgeos = load_dll('geos_c', fallbacks=['"
geos "/lib/libgeos_c.so'])"))
(("free = load_dll\\('c'\\)\\.free")
+ (string-append "free = load_dll('c', fallbacks=['"
+ glibc "/lib/libc.so.6']).free"))
+ (("free = load_dll\\('c', fallbacks=.*\\)\\.free")
(string-append "free = load_dll('c', fallbacks=['"
glibc "/lib/libc.so.6']).free"))))
#t)))))
--
2.28.0
