Dear Donna,
Thanks! I am trying to map the functional volume in MNI152 (SPM99) space
to the surface space (PALS) as metric. It is like the following:
caret_command -volume-map-to-surface-pals \
"" \
$metric_filename \
SPM99 \
$hemisphere \
METRIC_AVERAGE_NODES \
$fMRI_vol_filename \
-metric-afm
Could you please provide an example to use “select” in caret_command to
select the medial wall paint column as an overlay on top of the functional
overlay?
Many thanks!!!
Daniel
On 8/19/15, 6:38 PM, "caret-users-boun...@brainvis.wustl.edu on behalf of
Donna Dierker" <caret-users-boun...@brainvis.wustl.edu on behalf of
do...@brainvis.wustl.edu> wrote:
>Could you elaborate on how you are using caret_command?
>
>The Enable Medial Wall Override affects display, which is not applicable
>using caret_command, unless you are using -show-scenes, in which case you
>would select the medial wall paint column as an overlay on top of your
>functional overlay, in order to gray out the medial wall. It gets more
>complicated if you want to exclude the medial wall from processing, but
>isn't too hard (search for "select" in the caret_command full help
>output).
>
>
>On Aug 19, 2015, at 3:13 PM, "Yang, Daniel" <daniel.yj.y...@yale.edu>
>wrote:
>
>> Dear Caret Experts,
>>
>> In Paint Main, I can check “Enable Medial Wall Override” to gray out
>>medial wall. Is it possible to do so via caret_command?
>>
>> Many thanks!
>> Daniel
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