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Thanks to Ian Tickle. (I owe you one Ian). The fix is to change fstab on your linux box Add the flag nfsvers=2 to the line e.g. Apple:/Volume/x /usr/x nfs rw,nfsvers=2,soft,bg,retry=1 2 0 Best Jim James H. Naismith | Research mailto:[EMAIL PROTECTED] Professor of Chemical Biology | Teaching mailto:[EMAIL PROTECTED] BBSRC Career Development Fellow | Centre for Biomolecular Sciences | Office: 1334-463792 (24 hr) The North Haugh | Fax : 1334-467229 The University | Lab : 1334-467245 St. Andrews | In UK add 0 to start of number Fife Scotland, U.K., KY16 9ST | http://www.st-and.ac.uk/~strucbio -----Original Message----- From: Ian Tickle [mailto:[EMAIL PROTECTED] Sent: Monday, October 10, 2005 2:57 PM To: [EMAIL PROTECTED] Cc: [email protected] Subject: RE: [ccp4bb]: Mac and GUI: Summary Hi Jim, these posts look relevant to your problem: http://66.102.9.104/search?q=cache:Sekkbh5iMxcJ:https://bugzilla.redhat. com/bugzilla/show_bug.cgi%3Fid%3D155624+%2210.4%22+osx+nfs+linux+readdir &hl=en&client=firefox-a http://www.omnigroup.com/mailman/archive/macosx-admin/2005-June/042661.h tml Cheers -- Ian > -----Original Message----- > From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On > Behalf Of Jim Naismith > Sent: 10 October 2005 13:52 > To: 'CCP4 Bulletin Board' > Subject: [ccp4bb]: Mac and GUI: Summary > > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > Dear Brian and others, > Thanks for your comments. > > You all expressed it a little more eloquently than I did. To recap. > Linux programs which use a GUI to look for files which are > nfs mounted to the > Linux box from a Mac OSX10.4 system come up empty (this > includes at least COOT, > CCP4 and PYMOL). You can find the mount point but its empty. > You even fire up > the CCP4 gui from the "hidden" directory, but everything is > invisible. Its not > CCP4 specific. > > Others also emailed me confirming it's a widespread problem > not just my dumb > mistake. The first step to recovery is to accept you have a > problem. It is a > Tiger (OXS10.4) incompatibility with LINUX. It is replicated > by numerous Linux > distributions (red hat, ubuntu and SUSE). So it is unlikely > to have resulted > from a recent kernel change. Brian's email indicates it is a > OSX10.4 change from > OSX10.3. > > Now for the second step, anyone got a fix? (other than switch > hardware or > operating system etc). None of the people who confirmed the > problem had one. > There's enough troubled people who'd buy you a soft drink, > beer etc to make it > worth your while! > > > Best > Jim > > > James H. Naismith | Research > mailto:[EMAIL PROTECTED] > Professor of Chemical Biology | Teaching mailto:[EMAIL PROTECTED] > BBSRC Career Development Fellow | > Centre for Biomolecular Sciences | Office: 1334-463792 (24 hr) > The North Haugh | Fax : 1334-467229 > The University | Lab : 1334-467245 > St. Andrews | In UK add 0 to > start of number > Fife Scotland, U.K., KY16 9ST | > http://www.st-and.ac.uk/~strucbio > > > -----Original Message----- > From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On > Behalf Of Brian > Chapados > Sent: Saturday, October 08, 2005 12:13 AM > To: Ian Ollmann > Cc: CCP4 Bulletin Board > Subject: Re: [ccp4bb]: MAc and GUI > > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > > This bug appears to be both Tiger-dependent and Linux-dependent. > > I tested listing a directory through ccp4i (5.0.2) that was > NFS mounted > from either OS X 10.3.9 or 10.4.2 on was either a Linux or SGI system. > > On the SGI, I can see directories from both macs. On the > Linux machine, I > can only see the NFS mounted dir on the 10.3 machine. The > directory from the > 10.4 machine behaves the same way you described (empty listing). > > Brian > > On Fri, 7 Oct 2005, Ian Ollmann wrote: > > > *** For details on how to be removed from this list visit the *** > > *** CCP4 home page http://www.ccp4.ac.uk *** > > > > > > > > On Oct 7, 2005, at 2:39 PM, Jim Naismith wrote: > > > >> *** For details on how to be removed from this list visit the *** > >> *** CCP4 home page http://www.ccp4.ac.uk *** > >> > >> > >> > >> Calling all Mac users > >> > >> We are running the GUI on a linux system. We have a data > store on a MAC > >> tiger OS > >> (which we also run programs on). The issue is that on > terminal access I can > >> see > >> all my directories when I log in. I can even run scripts. > >> However the GUI cannot see anything in my MAC directories. > If I keep going > >> up > >> directory I can see the mount point but nothing below it. > > > > > ********************************************************************** CONFIDENTIALITY NOTICE This email contains confidential information and may be otherwise protected by law. Its content should not be disclosed and it should not be given or copied to anyone other than the person(s) named or referenced above. If you have received this email in error, please contact [EMAIL PROTECTED] **********************************************************************
