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Thank you all! Problem solved! -----Original Message----- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Sent: Thursday, January 19, 2006 6:40 PM To: Angela Yang Subject: Re: [ccp4bb]: electron density map & Pymol If you have a map calculated by CCP4 program, you can just click open and select the map file. The trick is that map files from CCP4 are .map which pymol does not recognize. You simply change the map file extension to .ccp4 and pymol will read it. After you load the file, just follow the pymol manual how to display it. to display density, type isomesh msh1 , map1 , 1.1 , (grp1) , 3.0 , 1 , 2 (where msh1 is the object name for this density selection, map1 is the object the density comes from, 1.1 is density level displayed, grp1 is object over which density is displayed, 3.0 is size of brick around selection, 1 is ‘state’, and 2 is border around selection. George Wisedchaisri On Thu, 19 Jan 2006, Angela Yang wrote: > Hi all, > > > > I want to generate a picture contains the electron density and the model. > But I have trouble to load the density map. Can anybody please tell me how > to do it? > > > > Thanks a lot, > > HY > >
