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Sabine Schneider wrote:
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Hi everyone,
I am using areaimol to compare surface differences between a ligand-bound and
apo structure,
but I don't really understand the meaning of the "contact area" it is writting out.
(the definition given in the program discription on the CCP4 website doesn't help me, sorry)
Thanks a lot in advance!
Sabine
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Hi Sabine,
You can have a look at the following CCP4 newsletter:
http://www.ccp4.ac.uk/newsletters/newsletter38/03_surfarea.html
Fig. 1 shows how the solvent accessible surface area is defined
Fig. 2 shows what the contact area is.
Guillaume
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Guillaume Evrard
European Molecular Biology Laboratory,
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