I am in working on data processed to 3.3A in H3. Using Phaser and a
tetramer model created from running a monomer through Molrep, I get
pretty good rotation solutions (based on Z-score). However, the problem
occurs when these solutions are run through the fast translation
portion of Phaser. After translation there appears to be no real
solutin and the Z-scores decrease considerably. Can someone help
explain why this may be happening and perhaps suggest a different
method of translation. Below is a list of the translation solutions.
Note the decrease from RFZ to TFZ.
fast translation H3 with tetramer from molrep
SPAC R 3
SOLU SET RFZ=19.6 TFZ=4.4
SOLU 6DIM ENSE tetra EULER 99.104
0.450 140.458 FRAC 0.78046 0.16014 0.00000
SOLU SET RFZ=19.6 TFZ=4.0
SOLU 6DIM ENSE tetra EULER 99.104
0.450 140.458 FRAC 0.80130 0.16014 0.00000
SOLU SET RFZ=19.2 TFZ=4.2
SOLU 6DIM ENSE tetra EULER 90.362 108.895 330.184 FRAC 0.64129 0.56287 0.00000
SOLU SET RFZ=19.2 TFZ=4.2
SOLU 6DIM ENSE tetra EULER 90.362 108.895 330.184 FRAC 0.74962 0.46704 0.00000
SOLU SET RFZ=19.6 TFZ=3.4
SOLU 6DIM ENSE tetra EULER 99.104
0.450 140.458 FRAC 0.82213 0.24348 0.00000
SOLU SET RFZ=19.2 TFZ=3.7
SOLU 6DIM ENSE tetra EULER 90.362 108.895 330.184 FRAC 0.69129 0.66704 0.00000
SOLU SET RFZ=19.2 TFZ=3.7
SOLU 6DIM ENSE tetra EULER 90.362 108.895 330.184 FRAC 0.67879 0.03370 0.00000
SOLU SET RFZ=19.2 TFZ=3.6
SOLU 6DIM ENSE tetra EULER 90.362 108.895 330.184 FRAC 0.64129 0.76287 0.00000
Thank you,
Angela Hoffort
- [ccp4bb]: good rotation, not so good translation Angela Hoffort
- Re: [ccp4bb]: good rotation, not so good translation David W Borhani
