POSA at the Godzik lab does exactly what you are after, flexibly!
http://fatcat.burnham.org/POSA/
Hi all=A3=AC
I want to produce structure-based multiple sequence alignment of my =20=
protein with five of its homologs on DALI server. However, when I =20
tried the "Database Search Form", only one homolog was picked up =20
from PDB. If I align my protein with each homolog by the "DaliLite =20
Pairwise comparison", how can I combine them together?
Thanks in advance.
Best regards,
=09
Sincerely,
Dalei Wu
Drug Discovery and Design Center
Shanghai Institute of Materia Medica
Shanghai Institutes for Biological Sciences
Chinese Academy of Sciences
555 Zu Chongzhi Road, Shanghai, 201203, China
[EMAIL PROTECTED]
2007-12-05