You can solibilize IB with your solublization buffer, measure the
solubilized protein concentration by a protein assay like Bradford. Then
adjust the concentration.

Most weight of IBs is not from proteins. However, your protein should be the
predominant protein in the IB if the expression is done right. I guess you
already have a refolding protocol. Your protein may refold well following
the protocol and many host cell proteins don't. You may get rid of many
cellular proteins just by doing the refolding.

Good luck!

Chun

Chun Luo, Ph.D. 
The Protein Expert
Accelagen, Inc. 
11585 Sorrento Valley Road, Suite 107 
San Diego, CA 92121 
TeL: 858-350-8085 ext 111 
Fax: 858-350-8001 
[EMAIL PROTECTED] 
www.accelagen.com


-----Original Message-----
From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Meg
Sent: Monday, July 28, 2008 7:57 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] estimate protein in Incl bod

We have our recombinant protein expressed in inclusion bodies we just wash 
the IBs and perform solubilization and refolding. Our solubilisation
protocol 
mentions making up the volume to contain 7-8 mg / ml protein.

1. how can we determine the total protein content in the inclusion bodies 
itself which are agregate mass . any good protocol if available.

2. we get our recombinant protein contaminated with host cell potein how to 
get rid of the host cell proteins.

kindly suggest.

thanks and regards,

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