This sounds to me like a compiler problem on your machine.  Try using
the latest Intel Ifort, Portland Group pgf95, or GFORTRAN compiler.

Axel Brunger


On Sep 12, 2008, at 2:56 AM, jxqi wrote:

Dear ccp4bbs,

When I was refining a protein structure using the rigid.inp in CNS(Version 1.21), an error occured saying that the asymmetric map unit is incompatible with the symmetry operator.The model I used was first refined by the Rafmac5.I had met the same problem when I tried to add water molecues using the waterpick.inp program.


%XMDOAS3 error encountered: Asymmetric map unit is incompatible with symmetry operators.
   (CNS is in mode: SET ABORT=NORMal END)
 *****************************************************
 ABORT mode will terminate program execution.
 *****************************************************

Thank you very much for your suggestions!

Best
Janxon

Axel T. Brunger
Investigator,  Howard Hughes Medical Institute
Professor of Molecular and Cellular Physiology
Stanford University

Web:    http://atbweb.stanford.edu
Email:  [EMAIL PROTECTED]
Phone:  +1 650-736-1031
Fax:    +1 650-745-1463






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