You seem to be describing the MCS found in many TEV-site-containing expression plasmids (am I missing something?) E.g., look at the sequences in Sheffield et al., Protein Expression and Purification 15, 34 –39 (1999) (let me know if you want a PDF, I don't want to send it to the whole bb)

On 5 Jun 2009, at 5:41 PM, Jacob Keller wrote:

Dear Crystallographers,

Does anybody have a TEV-protease-site-coding nucleotide sequence with a commonly-used restriction site in it, preferably right at the end? Alternatively, does some somebody know of a program to determine all equivalent codon permutations for a small coding region, filtered for resulting restriction site possibilities? It seems like it would be an easy enough script to write...

(I have already done some googling around for such a program, with not much luck.)

Jacob

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Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
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email: j-kell...@northwestern.edu
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Patrick J. Loll, Ph. D.                                 
Professor of Biochemistry & Molecular Biology
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