sometimes change in ph also dissocaites the complex,so you need to screen
best buffer ph for your protein complex.

atul kumar

On Sun, May 23, 2010 at 8:18 PM, Maia Cherney <ch...@ualberta.ca> wrote:

> -------- Original Message --------
> Subject:        Is it possible for the Tris buffer to strip the Zn ions
> from the Zinc Finger motif of a protein?
> Date:   Sun, 23 May 2010 08:45:55 -0600
> From:   Maia Cherney <ch...@ualberta.ca>
> To:     ruheng <rh_ibp2...@hotmail.com>
>
>
>
> The complex can dissociate without loosing Zn. For example, if you dilute
> it too much. There is an equilibrium between the concentrations of complex
> and the individual components.
>
> Maia
>
>
>
> Date: Sat, 22 May 2010 11:17:41 +0800
> From: rh_ibp2...@hotmail.com
> Subject: [ccp4bb]
> To: CCP4BB@JISCMAIL.AC.UK
>
> Dear all,
>
> Recently, I am working on a complex which includes two protein subunits.
> The interaction was based on the Zinc Finger motif of one protein. I
> co-purified the complex by nickel affinity column with one protein bearing a
> C terminal His tag and the other without any affinity tags. However, the
> complex was disassociated when applied to size exclusion chromatography. The
> buffer I use for SEC is 20mM Tris-HCl, 150mM NaCl, 1mM DTT, 5% Glycerol, pH
> 7.5, whearas the buffer I use for nickel affinity column is 50mM Na2HPO4,
> 10mM KH2PO4, 137mM NaCl, 2.7mM KCl, 10% Glycerol, pH7.4. So I am wondering
> is it possible for the Tris buffer to strip the Zn ions from the Zinc Finger
> motif of one protein that leads to the destruction of the complex?
>
> I will be very appreciated if anyone has some experience in such case and
> would like to share with me!
>
>
> Sincerely,
>
> Heng
>
>
> Institute of Biophysics,
> Chinese Academy of Sciences,
> Beijing 100101, China
>
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