If you ask for Real space R factor from overlapmap it gives you the mean
density for eaxch residue main chain and side chain, or mean density at
atom centre. It is rather confusedly labelled Fobs(mc) etc.
You could convert this to sigma level by just dividing the values.
Eleanor
The Hailiang Zhang wrote:
Hi,
Phenix.model_vs_data offers a great function which prints out the sigma
level of the electron density at each residue or atom center. This is very
useful comparing the relative density between two maps at the given
region, however, it is running a little bit slow. I am just wondering
whether some CCP4 subroutines also provides the similar function (didn't
find in overlapmap). Thanks a lot!
Best Regards, Hailiang
