Thanks for clearing that. Setting the mosflm executable to the ccp4
version, in combination with either the fink or the system wish, gives a
nicely working imosflm. And thanks for the fink packages...
Engin
On 7/6/10 6:36 AM, William G. Scott wrote:
Remove both.
On OS X, 10.6, imosflm uses the tcl/tk supplied with OS X, and the latest
mosflm is in ccp4, so there is no need for any of that. Just use what is in
ccp4.
Sorry for this.
On Jul 5, 2010, at 4:34 PM, Engin Özkan wrote:
Hi everybody,
I was doing a regular fink update (OS X 10.6.4, 32-bit fink) when I encountered
a silly outcome, which I thought others might have observed. During the imosflm
update, I get an error saying that imosflm depends on mosflm, and it also
conflicts with mosflm at the same time.
This was my list of mosflm-related packages:
% fink list mosflm
Information about 9265 packages read in 0 seconds.
(i) imosflm 1:1.0.4-3 Installs mosflm GUI
for use with X11 TclTk
imosflm-aqua 1:1.0.4-3 Installs mosflm GUI
for use with aqua TclTk
i mosflm 7.0.6-2 X-ray data processing,
large display
And below is the error. A workaround is removing mosflm, and using ipmosflm
from the ccp4 installation.
Is any of this expected with these two packages under fink?
Best,
Engin
The package 'imosflm' will be installed.
Reading dependency for imosflm-1.0.4-3...
The following package will be installed or updated:
imosflm
Reading buildlock packages...
All buildlocks accounted for.
/sw/bin/dpkg-lockwait -i
/sw/fink/dists/unstable/main/binary-darwin-i386/sci/imosflm_1.0.4-3_darwin-i386.deb
dpkg: considering removing mosflm in favour of imosflm ...
dpkg: no, cannot remove mosflm (--auto-deconfigure will help):
imosflm depends on mosflm (>= 7.0.6)
mosflm is to be removed.
dpkg: regarding .../imosflm_1.0.4-3_darwin-i386.deb containing imosflm:
imosflm conflicts with mosflm
mosflm (version 7.0.6-2) is installed.
/sw/bin/dpkg: error processing
/sw/fink/dists/unstable/main/binary-darwin-i386/sci/imosflm_1.0.4-3_darwin-i386.deb
(--install):
conflicting packages - not installing imosflm
Errors were encountered while processing:
/sw/fink/dists/unstable/main/binary-darwin-i386/sci/imosflm_1.0.4-3_darwin-i386.deb
### execution of /sw/bin/dpkg-lockwait failed, exit code 1
Failed: can't install package imosflm-1.0.4-3
--
Engin Özkan
Post-doctoral Scholar
Laboratory of K. Christopher Garcia
Howard Hughes Medical Institute
Dept of Molecular and Cellular Physiology
279 Campus Drive, Beckman Center B173
Stanford School of Medicine
Stanford, CA 94305
ph: (650)-498-7111
--
Engin Özkan
Post-doctoral Scholar
Laboratory of K. Christopher Garcia
Howard Hughes Medical Institute
Dept of Molecular and Cellular Physiology
279 Campus Drive, Beckman Center B173
Stanford School of Medicine
Stanford, CA 94305
ph: (650)-498-7111
