On Tue, Jun 14, 2011 at 2:51 PM, wtempel <wtem...@gmail.com> wrote:

> Dear colleagues,
> following a discussion in our lab, I have volunteered to dig out
> articles from the literature about erroneous assignments of non-water
> entities such as metal ions, halides in protein models. For example I
> have the faint recollection that data mining of the PDB for suspect
> "water" assemblies matching the geometry of coordinated cations has
> previously been described. But none of my google searches has turned
> up the references I was looking for. Could someone point me in the
> right direction, please?
>

Do you mean metals incorrectly annotated as waters, or vice-versa?  The
latter case is discussed here:

http://www.ncbi.nlm.nih.gov/pubmed/18614239

-Nat

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