Yuri wrote:
Hello Everyone, A little off topic but, what is a good way to show (publication quality) multiple sequence alignment? I am trying to show conserved regions in related proteins from different organisms. Thank you -- Yuri Pompeu
or clustalw, e.g. http://npsa-pbil.ibcp.fr/cgi-bin/align_clustalw.pl You can save the HTML to your disk and edit it with mozilla (seamonkey), print to pdf, or grab screenshot for a gif. Color is limited to characters not background, which in my opinion looks better anyway. One could use photoshop on the gif to color background - but then maybe easier to use ESPript
