DynDom version 1.5 is part of the CCP4 suite. There is an interface for it under Program List.
Although Steve Hayward appears to have a new version DynDom3D which we don't have. No idea if it would be better for your case. HTH Martyn On Fri, 2011-08-26 at 11:28 +0200, Matthew BOWLER wrote: > Dear Stephen, > I find DynDom very good (http://fizz.cmp.uea.ac.uk/dyndom/) > otherwise the morph server > (http://molmovdb.mbb.yale.edu/molmovdb/morph/) also performs similar > analysis, cheers, Matt. > > > On 26/08/2011 11:25, Stephen Cusack wrote: > > We have structures of two states of a large multi-domain protein in > > which domain > > movements of up to 30 degrees are observed. Is there a programme > > available which > > attempts to determine rigid-body units and hinge regions in an > > 'unbiased' way? > > thanks for your suggestions, > > Stephen Cusack > > > -- *********************************************************************** * * * Dr. Martyn Winn * * * * STFC Daresbury Laboratory, Daresbury, Warrington, WA4 4AD, U.K. * * Tel: +44 1925 603455 E-mail: martyn.w...@stfc.ac.uk * * Fax: +44 1925 603634 Skype name: martyn.winn * * URL: http://www.ccp4.ac.uk/martyn/ * ***********************************************************************
