On Tue, 2011-10-04 at 15:25 -0700, Jun Liao wrote: > I want to calculate the surface curvature for my proteins in a > quantitative way and show the results in a graphics software such as > Pymol
Surface Racer http://apps.phar.umich.edu/tsodikovlab/index_files/Page756.htm will output curvature per atom. The easiest way to get this info rendered in pymol is to move the curvature values into the b-factor column. -- "I'd jump in myself, if I weren't so good at whistling." Julian, King of Lemurs
