Dear All,
I need to deposit in the PDB the co-ordinates of a protein with an
internal truncation.
If I do this in the normal way with consecutive numbering according to
the actual polypeptide sequence
in the crystal, the residue numbers after the truncation will not
correspond to the equivalent residues
in the untruncated protein (of which there is also a structure). Is
there any good solution to this problem?
thanks
Stephen Cusack
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Dr. Stephen Cusack,
Head of Grenoble Outstation of EMBL
Group leader in structural biology of protein-RNA complexes and viral proteins
Joint appointment in EMBL Genome Biology Programme
Director of CNRS-UJF-EMBL International Unit (UMI 3265) for Virus Host Cell
Interactions (UVHCI)
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Email: cus...@embl.fr
Website: http://www.embl.fr
Tel: (33) 4 76 20 7238 Secretary (33) 4 76 20 7123
Fax: (33) 4 76 20 7199
Postal address: EMBL Grenoble Outstation, 6 Rue Jules Horowitz, BP181, 38042
Grenoble Cedex 9, France
Delivery address: EMBL Grenoble Outstation, Polygone Scientifique,
6 Rue Jules Horowitz, 38042 Grenoble, France
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