Perhaps IBIS does what you want? http://www.ncbi.nlm.nih.gov/Structure/ibis/ibis.cgi
"IBIS ... infers/predicts interacting partners and binding sites by homology " -- David On 8 August 2012 07:33, Careina Edgooms <careinaedgo...@yahoo.com> wrote: > Dear ccp4ers > > I just wonder whether anybody knows if the PISA software could be > used/modified to detect potential interfaces of interaction of different > proteins? This would be very useful as a tool to validate protein-protein > interactions detected by in vivo methods such as yeast 2 hybrid screens. If > PISA is not quite there yet, does anyone know of other software that could > do a similar thing? > > Best > Careina >