Dear All, I have been working on a high resolution protein structure using Shelx for refinement. In the PDB output by Shelxl the hydrogen atom names are in duplicate which is causing difficulty in PDB deposition. I am aware of the use of shelxpro's B option to prepare for pdb deposition, it unfortunately it does not save the H atoms. Is any one here aware of a way to save Hydrogen atoms correctly such that the prepared pdb file could be successfully submitted to PDB with the Hydrogens intact.
Swastik