If you "refine crystal mosaicity" (I assume there is a way to do that in the
gui)
then scalepack prints out a single value for the crystal (search the logfile
for mosaicity)
eab
On 05/16/2014 12:07 PM, hongshi WANG wrote:
Dear all,
Thanks for all your reply and useful comment on this.
Harry,
You are right. I think there are individual mosaicity value corresponding to
each image from scalepack.
Clearly, we can get either average or range for report.
best,
Hongshi
On Fri, May 16, 2014 at 2:26 AM, Harry Powell <ha...@mrc-lmb.cam.ac.uk
<mailto:ha...@mrc-lmb.cam.ac.uk>>
wrote:
Hi
I'm sure that a real HKL or Denzo/Scalepack expert will correct me, but my
recollection is that you
don't use any of the values from Denzo, but the value from Scalepack (see
http://www.hkl-xray.com/sites/default/files/HKL2000manual/chapter3/step14-1.htm,
for example).
On 16 May 2014, at 00:26, hongshi WANG wrote:
Hello everyone,
I am gonna report the mosaicity of my data set as required by the journal.
I processed the data
using HKL2000. So I checked the denzo log file. I found many different
mosaicity values. The first
one is default input (0.3), the rest are corresponding to specific images.
I think the mosaicity
value required should be an overall value or averaged value. Could you
please let me know how I can
get it. Or some other software can determine it.
I really appreciate your help and response!
Hongshi
Harry
--
** note change of address **
Dr Harry Powell, MRC Laboratory of Molecular Biology, Francis Crick Avenue,
Cambridge Biomedical
Campus, Cambridge CB2 0QH
Chairman of European Crystallographic Association SIG9 (Crystallographic
Computing)