The easiest is modeller via chimera. You can use I-TASSER server but it decides for itself what to do... You have some control too. You can use the sec structure from itasser and then go to modeller in chimera
You can use modeller in the interfaces it provides in the web (mod web ...) or modeller directly with command files and finally swissmodel Jackie Vitali Cleveland State Univ On Fri, Dec 9, 2016 at 4:05 PM, Myeongseon Lee (이명선) < 00000e01bd27cd0f-dmarc-requ...@jiscmail.ac.uk> wrote: > Hi, all. > > Could you anyone recommend me modeling programs for protein tertiary > structure? > > I have 3D strunture of a template protein and amino acid sequence of my > protein. These two proteins are very close structurally and functionally. > > I have done this kind of modeling with template 3D structure and amino > acid sequence of an unknown structure long time ago for other project. But, > unfortunately, I could not remember what program I have used at that time. > > Have a great day. > > > Sent from my Samsung device >
