I'm fond of RaptorX
++++++++++++++++++++++++++++++++++++++++++ Phoebe A. Rice Dept. of Biochemistry & Molecular Biology The University of Chicago pr...@uchicago.edu<mailto:pr...@uchicago.edu> https://voices.uchicago.edu/phoebericelab/ ________________________________ From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of Missoury Sophia [sophia.misso...@u-psud.fr] Sent: Wednesday, December 06, 2017 9:20 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] secondary structure prediction Modeller Sophia Missoury ________________________________ De: "Smith Liu" <smith_liu...@163.com> À: CCP4BB@JISCMAIL.AC.UK Envoyé: Mercredi 6 Décembre 2017 16:04:12 Objet: Re: [ccp4bb] secondary structure prediction Rosetta <https://maas.mail.163.com/dashi-web-extend/html/proSignature.html?iconUrl=https://nos.netease.com/mail-online/qiyelogo/defaultAvatar.png&name=Smith%20Liu&uid=smith_liu123%40163.com&ftlId=1&items=%5B%22%E9%82%AE%E7%AE%B1%EF%BC%9Asmith_liu123%40163.com%22%5D> [https://nos.netease.com/mail-online/qiyelogo/defaultAvatar.png] Smith Liu 邮箱：smith_liu...@163.com 签名由 网易邮箱大师<https://mail.163.com/dashi/dlpro.html?from=mail88> 定制 在2017年12月06日 22:14，zheng zhou<mailto:zhengzho...@gmail.com> 写道： Dear CCP4 community, Sorry for the off-topic question. I am trying to design constructs for structure studies. It only has a homolog structure in PDB with sequence identity ~20%. When I blast against PDB sequence, there are quite a few motif hits (30~40aa, identity 40~50%). Any prediction tools utilize this information? Thanks for your advice in advance. Best, Zheng
