Hi Bernard, I found a script I made a long time ago which produces a native Patterson. I tested it with our reasonable recent CCP4 version and it still works!
You have to copy the attached script to your linux directory and make it executable (type chmod +rwx makpat). To generate a patterson e.g. from myfile.mtz, you type makpat myfile It will generate a Patterson map , a postscript file and a log file with a peaklist. Good luck! Herman Von: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] Im Auftrag von Bernhard Rupp Gesendet: Dienstag, 8. Mai 2018 23:39 An: CCP4BB@JISCMAIL.AC.UK Betreff: [EXTERNAL] [ccp4bb] Native Patterson Plot Hi Fellows/Developers, I am trying to create a native Patterson map plot, but in ccp4i on windows the PS plot file (*.plt) is mutilated https://www.dropbox.com/s/f3cl2980qzws3gj/mono_15_1.plt?dl=0<https://urldefense.proofpoint.com/v2/url?u=https-3A__www.dropbox.com_s_f3cl2980qzws3gj_mono-5F15-5F1.plt-3Fdl-3D0&d=DwMFAg&c=Dbf9zoswcQ-CRvvI7VX5j3HvibIuT3ZiarcKl5qtMPo&r=HK-CY_tL8CLLA93vdywyu3qI70R4H8oHzZyRHMQu1AQ&m=fNVrlwrMgFCIbEnEw8KnpDk2sKJFRPBQwe51Hvn2HUQ&s=YYiTzSB85BNccOK4OsWtQ3Qom-mh9pNv6qZVErMlSws&e=> (wrong orientation & partly off paper) when viewed in ghostview. I vaguely recall these being mapslicer files, but starting win ccp4i mapslicer from the interface entrails the attached error message. Alternatively, does one know of another way of getting a quick native Patterson plot? Neither phenix nor ccp4i2 seem to offer a job menu item.. Many thanks for your help. Best, BR ------------------------------------------------------ Bernhard Rupp http://www.hofkristallamt.org/<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.hofkristallamt.org_&d=DwMFAg&c=Dbf9zoswcQ-CRvvI7VX5j3HvibIuT3ZiarcKl5qtMPo&r=HK-CY_tL8CLLA93vdywyu3qI70R4H8oHzZyRHMQu1AQ&m=fNVrlwrMgFCIbEnEw8KnpDk2sKJFRPBQwe51Hvn2HUQ&s=HBogm0F5Q3AlZOQydbf6VzfJCPvUV4gUL1uGM2QOzF0&e=> b...@hofkristallamt.org<mailto:b...@hofkristallamt.org> +1 925 209 7429 +43 676 571 0536 ------------------------------------------------------ Many plausible ideas vanish at the presence of thought ------------------------------------------------------
makpat
Description: makpat
