You can have a look at Caver.
I find it quite easy to use and it worked for me on some weirdly shaped
cavities.
Gianluca Santoni, serial crystallographer
ESRF structural biology group
71 avenue des Martyrs
38027 Grenoble cedex (France)
On 04/04/2019 08:24, Fred Vellieux wrote:
Hi CCP4BBers,
With software constantly changing, new versions arriving to us and new
software reaching the intended audience, I am looking for the most
appropriate piece(s) of software to compute the volume of active site
"cavities" in related 3D structures.
I have tried to use Voidoo however I do not know where to download an
initial (and fairly comprehensive) cavity.lib file which I'd modify if
need be. The links on the USF web site appear to be broken.
I am running Linux.
Thanks for the advice,
Fred. Vellieux
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