I used to always do this in a text editor - old-fashioned by fast and works :) Petri
Petri Kursula ---------- Professor ---------- Department of Biomedicine University of Bergen, Norway http://www.uib.no/en/rg/petrikursula petri.kurs...@uib.no ---------- Faculty of Biochemistry and Molecular Medicine University of Oulu, Finland ————— > On 10 Dec 2019, at 16:11, Sudipta Bhattacharyya > <sudiptabhattacharyya.iit...@gmail.com> wrote: > > Dear community, > > I would really appreciate your suggestions for linking cysteine sulfenic acid > (one of the active site amino acid residues in my target protein) to rest of > the protein chain. Let me summarize what I did so far in coot - > > 1. I deleted the native cysteine residue at that location, then brought > cysteine sulfenic acid from the monomer library, then fit it in the density > and merged it, then ran refinement by refmac5, the entity fits really well > but the link is not established after the refinement . > > 2. In my version of coot (wincoot) I could not find "Extensions > Modelling > > Replace Residue"...option to change it. > > Thanks in advance for your suggestions and happy holidays! > > Best regards, > Sudipta > > > -- > Sudipta Bhattacharyya, PhD > Assistant Professor, > Department of Bioscience and Bioengineering, > Indian Institute of Technology Jodhpur, > Rajasthan, India. > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > <https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1> ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1