I used to always do this in a text editor - old-fashioned by fast and works :)
Petri

Petri Kursula
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Professor 
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Department of Biomedicine
University of Bergen, Norway
http://www.uib.no/en/rg/petrikursula
petri.kurs...@uib.no
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Faculty of Biochemistry and Molecular Medicine
University of Oulu, Finland
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> On 10 Dec 2019, at 16:11, Sudipta Bhattacharyya 
> <sudiptabhattacharyya.iit...@gmail.com> wrote:
> 
> Dear community,
> 
> I would really appreciate your suggestions for linking cysteine sulfenic acid 
> (one of the active site amino acid residues in my target protein) to rest of 
> the protein chain. Let me summarize what I did so far in coot  - 
> 
> 1. I deleted the native cysteine residue at that location, then brought 
> cysteine sulfenic acid from the monomer library, then fit it in the density 
> and merged it, then ran refinement by refmac5, the entity fits really well 
> but the link is not established after the refinement . 
> 
> 2. In my version of coot (wincoot) I could not find "Extensions > Modelling > 
> Replace Residue"...option to change it.
> 
> Thanks in advance for your suggestions and happy holidays!
> 
> Best regards,
> Sudipta
> 
> 
> -- 
> Sudipta Bhattacharyya, PhD
> Assistant Professor, 
> Department of Bioscience and Bioengineering,
> Indian Institute of Technology Jodhpur,
> Rajasthan, India.
> 
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