Thanks Paul, that has worked just fine. Cheers,
Sam From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> On Behalf Of Paul Emsley Sent: 26 February 2021 16:12 To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] Pymol Map range On 26/02/2021 16:07, Horrell, Sam (DLSLtd,RAL,LSCI) wrote: Hello BB, I'm trying to make an image of some electron density in pymol but am running into a problem, my atoms are half in and half out of the unit cell so I only get half the density. Has anyone ran into this problem previously, and if so, is there a way to shift the origin, extend the map, or something so everything is covered? I realise this is not a ccp4 problem exactly, so I am ready for the inevitable replies, but I imagine a program in ccp4 might be the answer. You can do it in Coot. Do the masking or whatever, then File -> Export Map Fragment Then use that map in PyMOL Paul. ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 -- This e-mail and any attachments may contain confidential, copyright and or privileged material, and are for the use of the intended addressee only. If you are not the intended addressee or an authorised recipient of the addressee please notify us of receipt by returning the e-mail and do not use, copy, retain, distribute or disclose the information in or attached to the e-mail. Any opinions expressed within this e-mail are those of the individual and not necessarily of Diamond Light Source Ltd. Diamond Light Source Ltd. cannot guarantee that this e-mail or any attachments are free from viruses and we cannot accept liability for any damage which you may sustain as a result of software viruses which may be transmitted in or with the message. Diamond Light Source Limited (company no. 4375679). Registered in England and Wales with its registered office at Diamond House, Harwell Science and Innovation Campus, Didcot, Oxfordshire, OX11 0DE, United Kingdom ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
