Hi Andy, I’ve used PINTS, http://www.russelllab.org/cgi-bin/tools/pints.pl
Hope that helps. Best, Julia -- Dr. Julia Griese Assistant Professor, Docent Department of Cell and Molecular Biology Uppsala University BMC, Box 596 SE-75124 Uppsala Sweden email: julia.gri...@icm.uu.se phone: +46-(0)18-471 4982 http://www.icm.uu.se/structural-biology/griese-lab/ From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> on behalf of Andrew Lovering <a.lover...@bham.ac.uk> Reply-To: Andrew Lovering <a.lover...@bham.ac.uk> Date: Wednesday, 23 November 2022 at 11:17 To: "CCP4BB@JISCMAIL.AC.UK" <CCP4BB@JISCMAIL.AC.UK> Subject: [ccp4bb] PDBeMotif and like methods Dear CCP4 list, I have just tried accessing the “old” EBI PDBeMotif link and it is non-functional. Assuming that it may or may not be moved/unavailable, I am asking what your favourite methods are for mapping similar residue interactions in dissimilar folds i.e. if you have a nice network of 3 residues on “your” fold, what are the ways in which you can then find a similar arrangement on others? Thanks! Andy ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 När du har kontakt med oss på Uppsala universitet med e-post så innebär det att vi behandlar dina personuppgifter. För att läsa mer om hur vi gör det kan du läsa här: http://www.uu.se/om-uu/dataskydd-personuppgifter/ E-mailing Uppsala University means that we will process your personal data. For more information on how this is performed, please read here: http://www.uu.se/en/about-uu/data-protection-policy ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
