And yet another quick update- I rebooted the machine again and now the ccp4 version of Coot is working, but the standalone version is not (and the Phenix version continues to work). Just thought I would throw this out there for others... cheers, tom ________________________________ From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> on behalf of Tom Peat <0000b7e4a7a8af49-dmarc-requ...@jiscmail.ac.uk> Sent: Thursday, May 9, 2024 9:29 AM To: CCP4BB@JISCMAIL.AC.UK <CCP4BB@JISCMAIL.AC.UK> Subject: Re: [ccp4bb] Ubuntu and Coot
You don't often get email from 0000b7e4a7a8af49-dmarc-requ...@jiscmail.ac.uk. Learn why this is important<https://aka.ms/LearnAboutSenderIdentification> Just an update- I tested using Coot through the Phenix package and that seems to work (version 1.21-5207-000 and version 0.9.8.93 of Coot). Maybe a version issue? Or Phenix just comes with libraries that ccp4 doesn't? Not sure yet. cheers, tom ________________________________ From: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> on behalf of Martin Malý <martin.maly...@email.cz> Sent: Wednesday, May 8, 2024 5:31 PM To: CCP4BB@JISCMAIL.AC.UK <CCP4BB@JISCMAIL.AC.UK> Subject: Re: [ccp4bb] Ubuntu and Coot Dear Tom, I am using basically the same setup (Linux Mint 21.3 Xfce based on Ubuntu 22.04, CCP4 8.0.019 including Coot 0.9.8.93). Everything works well on my computer. I did not have any issues with Coot even in CCP4 8.0.017. I am sorry I don't know the reason of the error... Cheers, Martin On 08/05/2024 06:59, Tom Peat wrote: Hello All, I'm not sure if this is specific to me or whether I missed the fix, but I'm currently running Ubuntu 22.04.1 and updated to the latest ccp4 version 8.0.019 and Coot crashes. I tested to see whether it was just the ccp4 version by downloading coot separately into my bin directory (coot-Linux-x86_64-ubuntu-20.04.3-pre-release-gtk2-python as this was the latest version I could find) and that gave the same outcome: core: #f No core file found. No debugging Coot crashed in the previous version of ccp4 8.0.017, which is one reason I upgraded to 8.0.019. I'm not sure if there was an update to Ubuntu that may have started this whole debacle, but everything seemed to work last month... Has anyone else encountered this? Was there a fix? I googled several times and got some potential issues with libraries (libssl, etc), but none of these potential fixes helped. cheers, tom ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
