Dear Tim, Yes very excellent point… : ) I was just running this with the full path given, just installed in rush to test, didn’t have time for anything else. (I guess that’s what you get for rushing things)
That must be the problem (finding the other pieces of program ..as I don’t have the path set… indeed, obviously I am not very good in this). I had it in local dir. before working fine, not sure what I did. But maybe I try to do it properly tomorrow. (Will report if still doesn’t work. I assume it will.) Thanks for the help! Tommi On 3.4.2025, 21.47, "Tim Gruene" <[email protected]> wrote: Dear Tommi, looks like your shell sh does not have the correct PATH variable. Which is your sh linked to? Do you export PATH? Simplest work-around would possibly to install the XDS binaries in /usr/local/bin or another default directory. Best, Tim On Thu, 3 Apr 2025 16:27:11 +0000 "Kajander, Tommi A" <[email protected]<mailto:[email protected]>> wrote: > Hello all, > > I seem to have a problem running XDS: > > sh: forkxds: command not found > !!! ERROR !!! CANNOT OPEN OR READ FILE LP_01.tmp > Presumably, the independent jobs supposed to have been > started in the COLSPOT step have not run properly. This could be due > to incomplete installation of XDS where some of the > executables of the package are not included in the search path. > > Data converted from ESRF with eiger2cbf > > Runnings on mac mini M2 and OS Sequioa 15.3.2…. > > What could be wrong? (I think I do have the full installation there > for XDS.. I can try to reinstall of course…) > > bash-3.2$ ls /Users/…./XDS-Apple_M1/ > > 2cbf forkxds mcolspot merge2cbf > mintegrate_par rezel xds_par xscale cellparm > geocorr mcolspot_par mintegrate pix2lab xds > xdsconv xscale_par > > > > (used to work ok earlier but haven’t run on this computer but older > mac book pro or iMac…) > > Thanks, > Tommi > > > > > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a > mailing list hosted by www.jiscmail.ac.uk, terms & conditions are > available at https://www.jiscmail.ac.uk/policyandsecurity/ -- Tim Gruene Head of the CF Crystal Structure Analysis Faculty of Chemistry University of Vienna Phone: +43-1-4277-70202 GPG Key ID = A46BEE1A ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
