Hi all, "Egon Willighagen" <[EMAIL PROTECTED]> wrote:
> > Nina wrote: > > It's the latest JMol from SVN. Not that I absolutely need the latest > > version, > > but I've tried to recompile it with a newest version of iText, otherwise > > there > > is a conflict of some of my code using iText2.0.4 and JMol using older > > version. > > Please file a bug report with Jmol for this. > Done (with a fix :) When JMol 11.2 is used via CDKJMolAdapter from Bioclipse SVN, a null pointer exception occurs. The reason identified is that CDKJMolAdapter getAtomSetAuxiliaryInfo method returns null by default, which is not checked in ModelLoader iterateOverAllNewModels method. https://sourceforge.net/tracker/index.php?func=detail&aid=1740904&group_id=23629&atid=379133 The same problem (and same fix) is with JMol 11.3. > > This way JMol itself is compiling and working fine but > > CDKJMolAdapter is not. > > OK, will update Jmol in SVN soon. Please file a bug report with Bioclipse > for this. Bioclipse is using JMol version compiled with itext-0.94 , not sure if it is 11.2 , which comes with itext-1.4.5. Regards, Nina ------------------------------------------------------------------------- This SF.net email is sponsored by DB2 Express Download DB2 Express C - the FREE version of DB2 express and take control of your XML. No limits. Just data. Click to get it now. http://sourceforge.net/powerbar/db2/ _______________________________________________ Cdk-user mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/cdk-user
