On Tue, Nov 30, 2010 at 2:58 PM, Thomas Strunz <[email protected]> wrote:
> A second issue is, if the query Molecule is a common fragment in the > database, let's assume benzene, and llike 80% of the fingerprints match, how > do you handle that and keep performance? subgraph matches on so mnay > structures will no perfrom well. How can you prevent that with very common > substructures? It depends on where those substructures are coming from. If the user puts in some thing ver non-specific you could throw up a a warning if you are generating the queries, then don't generate anything too small :) -- Rajarshi Guha NIH Chemical Genomics Center ------------------------------------------------------------------------------ Increase Visibility of Your 3D Game App & Earn a Chance To Win $500! Tap into the largest installed PC base & get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev _______________________________________________ Cdk-user mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/cdk-user
