Lochana,
As an alternative , try
http://ambit.sourceforge.net/ambit2-core/apidocs/ambit2/core/io/RawIteratingSDFReader.html
from
ambit2-io package.
Nina
On 19 September 2013 15:45, Nina Jeliazkova <[email protected]>wrote:
>
>
>
> On 19 September 2013 15:37, lochana menikarachchi <[email protected]>wrote:
>
>> Hi Nina,
>>
>> I did try the RandomAccessSDFReader. It took few minutes to build the
>> index for an SD file with 50,000 structures. What I am saying is what ever
>> MarvinView does to build index (if it is using an index) is much faster. I
>> am wondering how it does that.
>>
>>
> What it probably does is that it does not wait for the index to complete.
> The first ~50 structures can be showed without the whole index being
> complete. Somebody already suggested using threads to implement this.
>
> Nina
>
>
>
>> Lochana
>>
>>
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