Usually the distance ranges used to define a pharmacophore will be obtained
by examination of a set of ligand-protein structures, or else from a set of
ligand conformations.
On Thu, Mar 13, 2014 at 12:15 AM, Vaibhav <[email protected]> wrote:
> Greetings,
>
> I want to generate pharmacophore query of given set of molecules so for
> that purpose
>
> How to calculate the lower bound distance and upper bound distance between
> two atoms?
>
> How to evaluate the distance between pharmacophore groups?
>
> Your help will be appreciated
>
>
>
> Thanks & Regards,
>
> *VAIBHAV KANDALE.*
> *Jr. Bioinformatics Developer*
> *Ph no: 020-65600408 / **9404301685 <9404301685>*
> [email protected] <[email protected]>
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