Pass the molfile to what? To JMol?
Is there an example anywhere?

Tim


On 07/03/2017 16:42, Egon Willighagen wrote:
> On Tue, Mar 7, 2017 at 5:31 PM, Tim Dudgeon <tdudgeon...@gmail.com> wrote:
>> What's the state of play with rendering 3D structures with CDK?
>> I see some mention of this in the 2006 paper, but it seems to say that
>> 3D rendering is done using JMol?
> Yes, correct. We have had 3D viz in the CDK, with Java3D, but Jmol was better.
>
> There was a bridge between the APIs but the recommended approach is
> now to just pass a molfile or SMILES (depending on whether you have 3D
> coords already or not).
>
> Egon
>


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