Changeset: 0b113471dc92 for MonetDB
URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=0b113471dc92
Added Files:
        clients/Tests/MAL-signatures_all.malC.src
        clients/Tests/MAL-signatures_all.stable.err
        clients/Tests/MAL-signatures_all.stable.out
        clients/Tests/MAL-signatures_all.stable.out.int128
        clients/Tests/MAL-signatures_none.malC.src
        clients/Tests/MAL-signatures_none.stable.err
        clients/Tests/MAL-signatures_none.stable.out
        clients/Tests/MAL-signatures_none.stable.out.int128
        clients/Tests/SQL-dump_all.sql.src
        clients/Tests/SQL-dump_all.stable.err
        clients/Tests/SQL-dump_all.stable.out
        clients/Tests/SQL-dump_all.stable.out.int128
        clients/Tests/SQL-dump_all.stable.out.oid32
        clients/Tests/SQL-dump_all.stable.out.oid32.int128
        clients/Tests/SQL-dump_none.sql.src
        clients/Tests/SQL-dump_none.stable.err
        clients/Tests/SQL-dump_none.stable.out
        clients/Tests/SQL-dump_none.stable.out.int128
Removed Files:
        clients/Tests/MAL-signatures_sphinxclient.malC.src
        clients/Tests/MAL-signatures_sphinxclient.stable.err
        clients/Tests/MAL-signatures_sphinxclient.stable.out
        clients/Tests/MAL-signatures_sphinxclient.stable.out.int128
        clients/Tests/SQL-dump_bam.sql.src
        clients/Tests/SQL-dump_bam.stable.err
        clients/Tests/SQL-dump_bam.stable.out
        clients/Tests/SQL-dump_bam.stable.out.int128
        clients/Tests/SQL-dump_bam.stable.out.oid32
        clients/Tests/SQL-dump_bam.stable.out.oid32.int128
        clients/Tests/SQL-dump_gsl.sql.src
        clients/Tests/SQL-dump_gsl.stable.err
        clients/Tests/SQL-dump_gsl.stable.out
        clients/Tests/SQL-dump_gsl.stable.out.int128
        clients/Tests/SQL-dump_gsl.stable.out.oid32
        clients/Tests/SQL-dump_gsl.stable.out.oid32.int128
        clients/Tests/SQL-dump_nogeom.sql.src
        clients/Tests/SQL-dump_nogeom.stable.err
        clients/Tests/SQL-dump_nogeom.stable.out
        clients/Tests/SQL-dump_nogeom.stable.out.int128
Modified Files:
        clients/Tests/All
        clients/Tests/SQL-dump.stable.out.32bit
        configure.ag
Branch: mosaic
Log Message:

Merged with default branch.


diffs (truncated from 324920 to 300 lines):

diff --git a/clients/Tests/All b/clients/Tests/All
--- a/clients/Tests/All
+++ b/clients/Tests/All
@@ -3,9 +3,9 @@ HAVE_CFITSIO&HAVE_GEOM&!HAVE_GSL&!HAVE_L
 
HAVE_CFITSIO&HAVE_GEOM&HAVE_GSL&!HAVE_LIBR&!HAVE_SAMTOOLS&!HAVE_SPHINXCLIENT?MAL-signatures_gsl
 
HAVE_CFITSIO&HAVE_GEOM&HAVE_GSL&!HAVE_LIBR&HAVE_SAMTOOLS&!HAVE_SPHINXCLIENT?MAL-signatures_bam
 
HAVE_CFITSIO&HAVE_GEOM&HAVE_GSL&HAVE_LIBR&HAVE_SAMTOOLS&!HAVE_SPHINXCLIENT?MAL-signatures_R
-HAVE_CFITSIO&HAVE_GEOM&!HAVE_GSL&!HAVE_LIBR&!HAVE_SAMTOOLS&HAVE_SPHINXCLIENT?MAL-signatures_sphinxclient
 
!HAVE_CFITSIO&HAVE_GEOM&!HAVE_GSL&!HAVE_LIBR&!HAVE_SAMTOOLS&!HAVE_SPHINXCLIENT?MAL-signatures_nocfitsio
+HAVE_CFITSIO&HAVE_GEOM&HAVE_GSL&HAVE_LIBR&HAVE_SAMTOOLS&HAVE_SPHINXCLIENT?MAL-signatures_all
+!HAVE_CFITSIO&!HAVE_GEOM&!HAVE_GSL&!HAVE_LIBR&!HAVE_SAMTOOLS&!HAVE_SPHINXCLIENT?MAL-signatures_none
 HAVE_GEOM&!HAVE_GSL&!HAVE_SAMTOOLS?SQL-dump
-HAVE_GEOM&HAVE_GSL&!HAVE_SAMTOOLS?SQL-dump_gsl
-HAVE_GEOM&HAVE_GSL&HAVE_SAMTOOLS?SQL-dump_bam
-!HAVE_GEOM&!HAVE_GSL&!HAVE_SAMTOOLS?SQL-dump_nogeom
+HAVE_GEOM&HAVE_GSL&HAVE_SAMTOOLS?SQL-dump_all
+!HAVE_GEOM&!HAVE_GSL&!HAVE_SAMTOOLS?SQL-dump_none
diff --git a/clients/Tests/MAL-signatures_all.malC.src 
b/clients/Tests/MAL-signatures_all.malC.src
new file mode 100644
--- /dev/null
+++ b/clients/Tests/MAL-signatures_all.malC.src
@@ -0,0 +1,1 @@
+$RELSRCDIR/MAL-signatures.malC
diff --git a/clients/Tests/MAL-signatures_all.stable.err 
b/clients/Tests/MAL-signatures_all.stable.err
new file mode 100644
--- /dev/null
+++ b/clients/Tests/MAL-signatures_all.stable.err
@@ -0,0 +1,35 @@
+stderr of test 'MAL-signatures_all` in directory 'clients` itself:
+
+
+# 21:33:47 >  
+# 21:33:47 >  "mserver5" "--debug=10" "--set" "gdk_nr_threads=0" "--set" 
"mapi_open=true" "--set" "mapi_port=35607" "--set" 
"mapi_usock=/var/tmp/mtest-19610/.s.monetdb.35607" "--set" "monet_prompt=" 
"--forcemito" "--set" "mal_listing=2" 
"--dbpath=/home/sjoerd/Monet-stable/var/MonetDB/mTests_clients" "--set" 
"mal_listing=2"
+# 21:33:47 >  
+
+# builtin opt  gdk_dbpath = /home/sjoerd/Monet-stable/var/monetdb5/dbfarm/demo
+# builtin opt  gdk_debug = 0
+# builtin opt  gdk_vmtrim = no
+# builtin opt  monet_prompt = >
+# builtin opt  monet_daemon = no
+# builtin opt  mapi_port = 50000
+# builtin opt  mapi_open = false
+# builtin opt  mapi_autosense = false
+# builtin opt  sql_optimizer = default_pipe
+# builtin opt  sql_debug = 0
+# cmdline opt  gdk_nr_threads = 0
+# cmdline opt  mapi_open = true
+# cmdline opt  mapi_port = 35607
+# cmdline opt  mapi_usock = /var/tmp/mtest-19610/.s.monetdb.35607
+# cmdline opt  monet_prompt = 
+# cmdline opt  mal_listing = 2
+# cmdline opt  gdk_dbpath = 
/home/sjoerd/Monet-stable/var/MonetDB/mTests_clients
+# cmdline opt  mal_listing = 2
+
+# 21:33:48 >  
+# 21:33:48 >  "mclient" "-lmal" "-ftest" "-Eutf-8" "-i" "-e" 
"--host=/var/tmp/mtest-19610" "--port=35607"
+# 21:33:48 >  
+
+
+# 21:33:51 >  
+# 21:33:51 >  "Done."
+# 21:33:51 >  
+
diff --git a/clients/Tests/MAL-signatures_all.stable.out 
b/clients/Tests/MAL-signatures_all.stable.out
new file mode 100644
--- /dev/null
+++ b/clients/Tests/MAL-signatures_all.stable.out
@@ -0,0 +1,42706 @@
+stdout of test 'MAL-signatures_all` in directory 'clients` itself:
+
+
+# 21:33:47 >  
+# 21:33:47 >  "mserver5" "--debug=10" "--set" "gdk_nr_threads=0" "--set" 
"mapi_open=true" "--set" "mapi_port=35607" "--set" 
"mapi_usock=/var/tmp/mtest-19610/.s.monetdb.35607" "--set" "monet_prompt=" 
"--forcemito" "--set" "mal_listing=2" 
"--dbpath=/home/sjoerd/Monet-stable/var/MonetDB/mTests_clients" "--set" 
"mal_listing=2"
+# 21:33:47 >  
+
+# MonetDB 5 server v11.17.22 (hg id: 570fbe10eb64+)
+# This is an unreleased version
+# Serving database 'mTests_clients', using 8 threads
+# Compiled for x86_64-unknown-linux-gnu/64bit with 64bit OIDs dynamically 
linked
+# Found 7.734 GiB available main-memory.
+# Copyright (c) 1993-July 2008 CWI.
+# Copyright (c) August 2008-2014 MonetDB B.V., all rights reserved
+# Visit http://www.monetdb.org/ for further information
+# Listening for connection requests on mapi:monetdb://gaai.mullender.nl:35607/
+# Listening for UNIX domain connection requests on 
mapi:monetdb:///var/tmp/mtest-19610/.s.monetdb.35607
+# MonetDB/GIS module loaded
+# MonetDB/JAQL module loaded
+# MonetDB/SQL module loaded
+
+Ready.
+
+# 21:33:48 >  
+# 21:33:48 >  "mclient" "-lmal" "-ftest" "-Eutf-8" "-i" "-e" 
"--host=/var/tmp/mtest-19610" "--port=35607"
+# 21:33:48 >  
+
+#?*)
+command aggr.avg(b:bat[:oid,:dbl],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on dbl, also returns count
+
+command aggr.avg(b:bat[:oid,:dbl],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on dbl, also returns count
+
+command 
aggr.avg(b:bat[:oid,:dbl],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on dbl
+
+command aggr.avg(b:bat[:oid,:dbl],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on dbl
+
+command aggr.avg(b:bat[:oid,:flt],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on flt, also returns count
+
+command aggr.avg(b:bat[:oid,:flt],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on flt, also returns count
+
+command 
aggr.avg(b:bat[:oid,:flt],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on flt
+
+command aggr.avg(b:bat[:oid,:flt],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on flt
+
+command aggr.avg(b:bat[:oid,:lng],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on lng, also returns count
+
+command aggr.avg(b:bat[:oid,:lng],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on lng, also returns count
+
+command 
aggr.avg(b:bat[:oid,:lng],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on lng
+
+command aggr.avg(b:bat[:oid,:lng],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on lng
+
+command aggr.avg(b:bat[:oid,:wrd],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on wrd, also returns count
+
+command aggr.avg(b:bat[:oid,:wrd],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on wrd, also returns count
+
+command 
aggr.avg(b:bat[:oid,:wrd],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on wrd
+
+command aggr.avg(b:bat[:oid,:wrd],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on wrd
+
+command aggr.avg(b:bat[:oid,:int],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on int, also returns count
+
+command aggr.avg(b:bat[:oid,:int],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on int, also returns count
+
+command 
aggr.avg(b:bat[:oid,:int],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on int
+
+command aggr.avg(b:bat[:oid,:int],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on int
+
+command aggr.avg(b:bat[:oid,:sht],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on sht, also returns count
+
+command aggr.avg(b:bat[:oid,:sht],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on sht, also returns count
+
+command 
aggr.avg(b:bat[:oid,:sht],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on sht
+
+command aggr.avg(b:bat[:oid,:sht],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on sht
+
+command aggr.avg(b:bat[:oid,:bte],g:bat[:oid,:oid],e:bat[:oid,:any_1]) 
(X_4:bat[:oid,:dbl],X_5:bat[:oid,:wrd]) 
+address AGGRavg23_dbl;
+comment Grouped tail average on bte, also returns count
+
+command aggr.avg(b:bat[:oid,:bte],e:bat[:oid,:any_1]) 
(X_3:bat[:oid,:dbl],X_4:bat[:oid,:wrd]) 
+address AGGRavg22_dbl;
+comment Grouped tail average on bte, also returns count
+
+command 
aggr.avg(b:bat[:oid,:bte],g:bat[:oid,:oid],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg13_dbl;
+comment Grouped tail average on bte
+
+command aggr.avg(b:bat[:oid,:bte],e:bat[:oid,:any_1]):bat[:oid,:dbl] 
+address AGGRavg12_dbl;
+comment Grouped tail average on bte
+
+command aggr.avg(b:bat[:oid,:any_2]):dbl 
+address ALGavg;
+comment Gives the avg of all tail values
+
+function 
aggr.corr(e1:bat[:oid,:dbl],e2:bat[:oid,:dbl],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:dbl];
+function 
aggr.covar(e1:bat[:oid,:dbl],e2:bat[:oid,:dbl],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:dbl];
+function aggr.corr(e1:bat[:oid,:dbl],e2:bat[:oid,:dbl]):dbl;
+function aggr.covar(e1:bat[:oid,:dbl],e2:bat[:oid,:dbl]):dbl;
+function 
aggr.corr(e1:bat[:oid,:flt],e2:bat[:oid,:flt],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:flt];
+function 
aggr.covar(e1:bat[:oid,:flt],e2:bat[:oid,:flt],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:flt];
+function aggr.corr(e1:bat[:oid,:flt],e2:bat[:oid,:flt]):flt;
+function aggr.covar(e1:bat[:oid,:flt],e2:bat[:oid,:flt]):flt;
+function 
aggr.corr(e1:bat[:oid,:lng],e2:bat[:oid,:lng],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:lng];
+function 
aggr.covar(e1:bat[:oid,:lng],e2:bat[:oid,:lng],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:lng];
+function aggr.corr(e1:bat[:oid,:lng],e2:bat[:oid,:lng]):lng;
+function aggr.covar(e1:bat[:oid,:lng],e2:bat[:oid,:lng]):lng;
+function 
aggr.corr(e1:bat[:oid,:wrd],e2:bat[:oid,:wrd],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:wrd];
+function 
aggr.covar(e1:bat[:oid,:wrd],e2:bat[:oid,:wrd],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:wrd];
+function aggr.corr(e1:bat[:oid,:wrd],e2:bat[:oid,:wrd]):wrd;
+function aggr.covar(e1:bat[:oid,:wrd],e2:bat[:oid,:wrd]):wrd;
+function 
aggr.corr(e1:bat[:oid,:int],e2:bat[:oid,:int],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:int];
+function 
aggr.covar(e1:bat[:oid,:int],e2:bat[:oid,:int],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:int];
+function aggr.corr(e1:bat[:oid,:int],e2:bat[:oid,:int]):int;
+function aggr.covar(e1:bat[:oid,:int],e2:bat[:oid,:int]):int;
+function 
aggr.corr(e1:bat[:oid,:sht],e2:bat[:oid,:sht],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:sht];
+function 
aggr.covar(e1:bat[:oid,:sht],e2:bat[:oid,:sht],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:sht];
+function aggr.corr(e1:bat[:oid,:sht],e2:bat[:oid,:sht]):sht;
+function aggr.covar(e1:bat[:oid,:sht],e2:bat[:oid,:sht]):sht;
+function 
aggr.corr(e1:bat[:oid,:bte],e2:bat[:oid,:bte],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:bte];
+function 
aggr.covar(e1:bat[:oid,:bte],e2:bat[:oid,:bte],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:bte];
+function aggr.corr(e1:bat[:oid,:bte],e2:bat[:oid,:bte]):bte;
+function aggr.covar(e1:bat[:oid,:bte],e2:bat[:oid,:bte]):bte;
+command 
aggr.count_no_nil(b:bat[:oid,:any_1],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:wrd]
 
+address AGGRcount3nonils;
+command 
aggr.count(b:bat[:oid,:any_1],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:wrd]
 
+address AGGRcount3nils;
+comment Grouped count
+
+command 
aggr.count_no_nil(b:bat[:oid,:any_1],e:bat[:oid,:any_1]):bat[:oid,:wrd] 
+address AGGRcount2nonils;
+command aggr.count(b:bat[:void,:any_1],e:bat[:void,:any_2]):bat[:void,:wrd] 
+address AGGRcount2nils;
+command aggr.count(b:bat[:void,:any_1],e:bat[:oid,:any_2]):bat[:void,:wrd] 
+address AGGRcount2nils;
+comment Grouped count
+
+command 
aggr.count(b:bat[:oid,:any_1],g:bat[:oid,:oid],e:bat[:oid,:any_2],ignorenils:bit):bat[:void,:wrd]
 
+address AGGRcount3;
+command 
aggr.count(b:bat[:oid,:any_1],e:bat[:oid,:any_2],ignorenils:bit):bat[:oid,:wrd] 
+address AGGRcount2;
+comment Grouped count
+
+command aggr.cardinality(b:bat[:oid,:any_2]):lng 
+address ALGcard;
+comment Return the cardinality of the BAT tail values.
+
+command aggr.count_no_nil(b:bat[:any_1,:any_2]):wrd 
+address ALGcount_no_nil;
+comment Return the number of elements currently        in a BAT ignoring BUNs 
with nil-tail
+
+command aggr.count(b:bat[:any_1,:any],ignore_nils:bit):wrd 
+address ALGcount_nil;
+comment Return the number of elements currently in a BAT ignores               
BUNs with nil-tail iff ignore_nils==TRUE.
+
+command aggr.count(b:bat[:any_1,:any]):wrd 
+address ALGcount_bat;
+comment Return the current size (in number of elements) in a BAT.
+
+command aggr.exist(b:bat[:oid,:any_2],h:any_1):bit 
+address ALGexist;
+command aggr.histogram(b:bat[:any_1,:any_2]):bat[:any_2,:int] 
+address ALGhistogram;
+comment Produce a BAT containing the histogram over the tail values.
+
+command aggr.jsonaggr(val:bat[:oid,:dbl]):str 
+address JSONgroupStr;
+comment Aggregate the double values to array.
+
+command aggr.jsonaggr(val:bat[:oid,:str]):str 
+address JSONgroupStr;
+comment Aggregate the string values to array.
+
+function aggr.median(b:bat[:oid,:any_1]):any_1;
+command 
aggr.median(b:bat[:oid,:any_1],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:any_1]
 
+address AGGRmedian3;
+comment Grouped median aggregate
+
+command 
aggr.max(b:bat[:oid,:any_1],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:any_1]
 
+address AGGRmax3;
+command 
aggr.min(b:bat[:oid,:any_1],g:bat[:oid,:oid],e:bat[:oid,:any_2]):bat[:oid,:any_1]
 
+address AGGRmin3;
+command aggr.max(b:bat[:oid,:any_1],e:bat[:oid,:any_2]):bat[:oid,:any_1] 
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