> I would propose no changes to Clojure, no
> conditional compilation techniques or reader modifications.  Just
> things like macros that have simple functionality and that at most
> check one flag to conditionalize output.

I wouldn't immediately object to reader macro conditionalization here.  
Imagining each port of Clojure to be like a different Lisp  
implementation (yes, I know, it's not), one sees this all the time:

#+:sbcl
(defun foo (x) (bar))

#-:sbcl
(defun foo (x) (noz))


It's not a big stretch to imagine that being #+:clojure-clr and # 
+:clojure-jvm.

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