Script 'mail_helper' called by obssrc Hello community, here is the log from the commit of package avogadrolibs for openSUSE:Factory checked in at 2021-10-18 21:59:26 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/avogadrolibs (Old) and /work/SRC/openSUSE:Factory/.avogadrolibs.new.1890 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "avogadrolibs" Mon Oct 18 21:59:26 2021 rev:5 rq:925863 version:1.95.1 Changes: -------- --- /work/SRC/openSUSE:Factory/avogadrolibs/avogadrolibs.changes 2021-09-01 21:37:12.612879006 +0200 +++ /work/SRC/openSUSE:Factory/.avogadrolibs.new.1890/avogadrolibs.changes 2021-10-18 22:02:16.994097524 +0200 @@ -1,0 +2,20 @@ +Thu Oct 14 11:32:05 UTC 2021 - ecsos <ec...@opensuse.org> + +- Update to 1.95.1 + * Bug Fixes + - Fix disabled Balls and Sticks rendering on a fresh install (#744) + - Fix for loading settings (#732) + - Add ... to all input generators to indicate opening a dialog (#743) + - Fix reference axes menu item (#705) + - Continue rendering cartoons even if residues aren't found (#736) + - Enable script formats like cclib to ask for bond perception on read (#738) + * Features + - Initial display-only property tables (#711) + - Improve selection tool for layers (#729) + * Maintenance + - Make sure to run tests in avogadrolibs (including some fix for test failures) (#739) + * Translations + - Translations update from Weblate (#721) +- Fix build error for Leap with libmsym >= 0.2.0. + +------------------------------------------------------------------- Old: ---- avogadrolibs-1.95.0.tar.gz crystals-c3e2468fa42360499f0e73d215bddfe2245258aa.tar.gz New: ---- avogadrolibs-1.95.1.tar.gz crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44.tar.gz ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ avogadrolibs.spec ++++++ --- /var/tmp/diff_new_pack.3cEFw6/_old 2021-10-18 22:02:17.482097877 +0200 +++ /var/tmp/diff_new_pack.3cEFw6/_new 2021-10-18 22:02:17.482097877 +0200 @@ -30,9 +30,9 @@ %define sonum 1 %define libname libAvogadro%{sonum} %define molecules_rev b1e16c5dc6d15e72d30dd6c4fca31b2c12025efc -%define crystals_rev c3e2468fa42360499f0e73d215bddfe2245258aa +%define crystals_rev 4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44 Name: avogadrolibs -Version: 1.95.0 +Version: 1.95.1 Release: 0 Summary: Avogadro libraries for computational chemistry License: BSD-3-Clause @@ -43,7 +43,7 @@ # PATCH-FIX-UPSTREAM not-install-gwavi.patch -- Library only used locally so no need to install this helper Patch0: not-install-gwavi.patch BuildRequires: cmake >= 3.3 -BuildRequires: eigen3-devel +BuildRequires: eigen3-devel >= 2.91.0 BuildRequires: fdupes BuildRequires: gcc-c++ BuildRequires: hdf5-devel @@ -53,7 +53,7 @@ BuildRequires: cmake(Qt5Network) BuildRequires: cmake(Qt5Svg) BuildRequires: cmake(Qt5Widgets) -BuildRequires: cmake(libmsym) +BuildRequires: cmake(libmsym) >= 0.2.0 BuildRequires: pkgconfig(gl) BuildRequires: pkgconfig(glew) BuildRequires: pkgconfig(libarchive) ++++++ avogadrolibs-1.95.0.tar.gz -> avogadrolibs-1.95.1.tar.gz ++++++ /work/SRC/openSUSE:Factory/avogadrolibs/avogadrolibs-1.95.0.tar.gz /work/SRC/openSUSE:Factory/.avogadrolibs.new.1890/avogadrolibs-1.95.1.tar.gz differ: char 13, line 1 ++++++ crystals-c3e2468fa42360499f0e73d215bddfe2245258aa.tar.gz -> crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44.tar.gz ++++++ diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/carbonates/FeCO3-Siderte.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/carbonates/FeCO3-Siderte.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/carbonates/FeCO3-Siderte.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/carbonates/FeCO3-Siderte.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,118 @@ +# Part of the Crystallography Open Database +# All data on this site have been placed in the public domain by the +# contributors. +#------------------------------------------------------------------------------ +#$Date: 2018-07-06 22:25:45 +0300 (Fri, 06 Jul 2018) $ +#$Revision: 208882 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/5/00/00/5000036.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/. +# +data_5000036 +loop_ +_publ_author_name +'Effenberger, H.' +'Mereiter, K.' +'Zemann, J.' +_publ_section_title +; + Crystal structure refinements of magnesite, calcite, rhodochrosite, siderite, + smithonite, and dolomite, with discussion of some aspects of the + stereochemistry of calcite type carbonates +; +_journal_coden_ASTM ZEKRDZ +_journal_name_full +; + Zeitschrift f\"ur Kristallographie, Kristallgeometrie, Kristallphysik, + Kristallchemie +; +_journal_page_first 233 +_journal_page_last 243 +_journal_paper_doi 10.1524/zkri.1981.156.3-4.233 +_journal_volume 156 +_journal_year 1981 +_chemical_formula_sum 'C Fe O3' +_chemical_name_mineral Siderite +_chemical_name_systematic 'Iron carbonate' +_space_group_IT_number 167 +_symmetry_cell_setting trigonal +_symmetry_space_group_name_Hall '-R 3 2"c' +_symmetry_space_group_name_H-M 'R -3 c :H' +_cell_angle_alpha 90 +_cell_angle_beta 90 +_cell_angle_gamma 120 +_cell_formula_units_Z 6 +_cell_length_a 4.6916(4) +_cell_length_b 4.6916(4) +_cell_length_c 15.3796(16) +_cell_volume 293.2 +_exptl_crystal_density_meas 3.9 +_cod_depositor_comments +; + Updating bibliography and adding the summary chemical formula. + + Antanas Vaitkus, + 2018-07-06 +; +_cod_original_sg_symbol_H-M 'R -3 c H' +_cod_database_code 5000036 +loop_ +_symmetry_equiv_pos_as_xyz +x,y,z +-y,x-y,z +y-x,-x,z +-y,-x,1/2+z +x,x-y,1/2+z +y-x,y,1/2+z +-x,-y,-z +y,y-x,-z +x-y,x,-z +y,x,1/2-z +-x,y-x,1/2-z +x-y,-y,1/2-z +1/3+x,2/3+y,2/3+z +2/3+x,1/3+y,1/3+z +1/3-y,2/3+x-y,2/3+z +2/3-y,1/3+x-y,1/3+z +1/3-x+y,2/3-x,2/3+z +2/3-x+y,1/3-x,1/3+z +1/3-y,2/3-x,1/6+z +2/3-y,1/3-x,5/6+z +1/3+x,2/3+x-y,1/6+z +2/3+x,1/3+x-y,5/6+z +1/3-x+y,2/3+y,1/6+z +2/3-x+y,1/3+y,5/6+z +1/3-x,2/3-y,2/3-z +2/3-x,1/3-y,1/3-z +1/3+y,2/3-x+y,2/3-z +2/3+y,1/3-x+y,1/3-z +1/3+x-y,2/3+x,2/3-z +2/3+x-y,1/3+x,1/3-z +1/3+y,2/3+x,1/6-z +2/3+y,1/3+x,5/6-z +1/3-x,2/3-x+y,1/6-z +2/3-x,1/3-x+y,5/6-z +1/3+x-y,2/3-y,1/6-z +2/3+x-y,1/3-y,5/6-z +loop_ +_atom_site_label +_atom_site_type_symbol +_atom_site_symmetry_multiplicity +_atom_site_Wyckoff_symbol +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_occupancy +_atom_site_attached_hydrogens +_atom_site_calc_flag +Fe1 Fe2+ 6 b 0. 0. 0. 1. 0 d +C1 C4+ 6 a 0. 0. 0.25 1. 0 d +O1 O2- 18 e 0.27427(10) 0. 0.25 1. 0 d +loop_ +_atom_type_symbol +_atom_type_oxidation_number +Fe2+ 2.000 +C4+ 4.000 +O2- -2.000 diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/carbonates/NaHCO3-Nahcolite.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/carbonates/NaHCO3-Nahcolite.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/carbonates/NaHCO3-Nahcolite.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/carbonates/NaHCO3-Nahcolite.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,78 @@ +#------------------------------------------------------------------------------ +#$Date: 2018-01-15 12:00:33 +0200 (Mon, 15 Jan 2018) $ +#$Revision: 205222 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/1/01/10/1011016.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/ +# +# All data on this site have been placed in the public domain by the +# contributors. +# +data_1011016 +loop_ +_publ_author_name +'Zachariasen, W. H.' +_publ_section_title +; +The Crystal Lattice of Sodium Bicarbonate, Na H C O3 +; +_journal_coden_ASTM JCPSA6 +_journal_name_full 'Journal of Chemical Physics' +_journal_page_first 634 +_journal_page_last 639 +_journal_paper_doi 10.1063/1.1749342 +_journal_volume 1 +_journal_year 1933 +_chemical_compound_source 'synthetic by evaporation' +_chemical_formula_structural 'Na (H C O3)' +_chemical_formula_sum 'C H Na O3' +_chemical_name_mineral Nahcolite +_chemical_name_systematic 'Sodium hydrogen carbonate' +_space_group_crystal_system monoclinic +_space_group_IT_number 14 +_space_group_name_Hall '-P 2yn' +_space_group_name_H-M_alt 'P 1 21/n 1' +_cell_angle_alpha 90 +_cell_angle_beta 93.32 +_cell_angle_gamma 90 +_cell_formula_units_Z 4 +_cell_length_a 7.51(4) +_cell_length_b 9.70(4) +_cell_length_c 3.53(3) +_cell_volume 256.7 +_exptl_crystal_density_meas 2.21(1) +_cod_original_formula_sum 'H Na O3' +_cod_database_code 1011016 +loop_ +_space_group_symop_id +_space_group_symop_operation_xyz +1 x,y,z +2 1/2+x,1/2-y,1/2+z +3 -x,-y,-z +4 1/2-x,1/2+y,1/2-z +loop_ +_atom_site_label +_atom_site_type_symbol +_atom_site_symmetry_multiplicity +_atom_site_Wyckoff_symbol +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_occupancy +_atom_site_attached_hydrogens +_atom_site_calc_flag +Na1 Na1+ 4 e 0.278 0. 0.708 1. 0 d +C1 C4+ 4 e 0.069 0.236 0.314 1. 0 d +O1 O2- 4 e 0.069 0.367 0.314 1. 0 d +O2 O2- 4 e 0.2 0.169 0.183 1. 0 d +O3 O2- 4 e 0.939 0.169 0.444 1. 0 d +H1 H1+ 4 e 0.319 0.25 0.064 1. 0 d +loop_ +_atom_type_symbol +_atom_type_oxidation_number +Na1+ 1.000 +C4+ 4.000 +O2- -2.000 +H1+ 1.000 diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/halides/CaCl2-Hydrophilite.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/halides/CaCl2-Hydrophilite.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/halides/CaCl2-Hydrophilite.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/halides/CaCl2-Hydrophilite.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,79 @@ +#------------------------------------------------------------------------------ +#$Date: 2015-01-27 21:58:39 +0200 (Tue, 27 Jan 2015) $ +#$Revision: 130149 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/1/01/12/1011280.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/ +# +# All data on this site have been placed in the public domain by the +# contributors. +# +data_1011280 +loop_ +_publ_author_name +'van Bever, A K' +'Nieuwenkamp, W' +_publ_section_title +; +Die Kristallstruktur von Calciumchlorid, Ca Cl2 +; +_journal_coden_ASTM ZEKGAX +_journal_name_full +; +Zeitschrift fuer Kristallographie, Kristallgeometrie, Kristallphysik, +Kristallchemie (-144,1977) +; +_journal_page_first 374 +_journal_page_last 376 +_journal_volume 90 +_journal_year 1935 +_chemical_compound_source synthetic +_chemical_formula_structural 'Ca Cl2' +_chemical_formula_sum 'Ca Cl2' +_chemical_name_mineral Hydrophilite +_chemical_name_systematic 'Calcium chloride' +_space_group_IT_number 58 +_symmetry_cell_setting orthorhombic +_symmetry_Int_Tables_number 58 +_symmetry_space_group_name_Hall '-P 2 2n' +_symmetry_space_group_name_H-M 'P n n m' +_cell_angle_alpha 90 +_cell_angle_beta 90 +_cell_angle_gamma 90 +_cell_formula_units_Z 2 +_cell_length_a 6.24 +_cell_length_b 6.43 +_cell_length_c 4.2 +_cell_volume 168.5 +_exptl_crystal_density_meas 2.22 +_cod_database_code 1011280 +loop_ +_symmetry_equiv_pos_as_xyz +x,y,z +-x,-y,z +1/2+x,1/2-y,1/2-z +1/2-x,1/2+y,1/2-z +-x,-y,-z +x,y,-z +1/2-x,1/2+y,1/2+z +1/2+x,1/2-y,1/2+z +loop_ +_atom_site_label +_atom_site_type_symbol +_atom_site_symmetry_multiplicity +_atom_site_Wyckoff_symbol +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_occupancy +_atom_site_attached_hydrogens +_atom_site_calc_flag +Ca1 Ca2+ 2 a 0. 0. 0. 1. 0 d +Cl1 Cl1- 4 g 0.275(8) 0.325(8) 0. 1. 0 d +loop_ +_atom_type_symbol +_atom_type_oxidation_number +Ca2+ 2.000 +Cl1- -1.000 diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/halides/LiCl.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/halides/LiCl.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/halides/LiCl.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/halides/LiCl.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,262 @@ +#------------------------------------------------------------------------------ +#$Date: 2015-01-27 21:58:39 +0200 (Tue, 27 Jan 2015) $ +#$Revision: 130149 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/1/01/13/1011314.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/ +# +# All data on this site have been placed in the public domain by the +# contributors. +# +data_1011314 +loop_ +_publ_author_name +'Ievin'sh, A F' +'Straumanis, M' +'Karlsons, K' +_publ_section_title +; +Praezisionsbestimmung von Gitterkonstanten hygroskopischer Verbindungen +(Li Cl, Na Br). +; +_journal_coden_ASTM ZPCBAL +_journal_name_full +; +Zeitschrift fuer Physikalische Chemie, Abteilung B: Chemie der +Elementarprozesse, Aufbau der Materie +; +_journal_page_first 146 +_journal_page_last 150 +_journal_volume 40 +_journal_year 1938 +_chemical_formula_structural 'Li Cl' +_chemical_formula_sum 'Cl Li' +_chemical_name_systematic 'Lithium chloride' +_space_group_IT_number 225 +_symmetry_cell_setting cubic +_symmetry_Int_Tables_number 225 +_symmetry_space_group_name_Hall '-F 4 2 3' +_symmetry_space_group_name_H-M 'F m -3 m' +_cell_angle_alpha 90 +_cell_angle_beta 90 +_cell_angle_gamma 90 +_cell_formula_units_Z 4 +_cell_length_a 5.12952(4) +_cell_length_b 5.12952(4) +_cell_length_c 5.12952(4) +_cell_volume 135.0 +_cod_database_code 1011314 +loop_ +_symmetry_equiv_pos_as_xyz +x,y,z +y,z,x +z,x,y +x,z,y +y,x,z +z,y,x +x,-y,-z +y,-z,-x +z,-x,-y +x,-z,-y +y,-x,-z +z,-y,-x +-x,y,-z +-y,z,-x +-z,x,-y +-x,z,-y +-y,x,-z +-z,y,-x +-x,-y,z +-y,-z,x +-z,-x,y +-x,-z,y +-y,-x,z +-z,-y,x +-x,-y,-z +-y,-z,-x +-z,-x,-y +-x,-z,-y +-y,-x,-z +-z,-y,-x +-x,y,z +-y,z,x +-z,x,y +-x,z,y +-y,x,z +-z,y,x +x,-y,z +y,-z,x +z,-x,y +x,-z,y +y,-x,z +z,-y,x +x,y,-z +y,z,-x +z,x,-y +x,z,-y +y,x,-z +z,y,-x +x,1/2+y,1/2+z +1/2+x,y,1/2+z +1/2+x,1/2+y,z +y,1/2+z,1/2+x +1/2+y,z,1/2+x +1/2+y,1/2+z,x +z,1/2+x,1/2+y +1/2+z,x,1/2+y +1/2+z,1/2+x,y +x,1/2+z,1/2+y +1/2+x,z,1/2+y +1/2+x,1/2+z,y +y,1/2+x,1/2+z +1/2+y,x,1/2+z 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+z,1/2+y,1/2-x +1/2+z,y,1/2-x +1/2+z,1/2+y,-x +loop_ +_atom_site_label +_atom_site_type_symbol +_atom_site_symmetry_multiplicity +_atom_site_Wyckoff_symbol +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_occupancy +_atom_site_attached_hydrogens +_atom_site_calc_flag +Li1 Li1+ 4 a 0. 0. 0. 1. 0 d +Cl1 Cl1- 4 b 0.5 0.5 0.5 1. 0 d +loop_ +_atom_type_symbol +_atom_type_oxidation_number +Li1+ 1.000 +Cl1- -1.000 diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/nitrides/TiN-Osbornite.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/nitrides/TiN-Osbornite.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/nitrides/TiN-Osbornite.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/nitrides/TiN-Osbornite.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,258 @@ +#------------------------------------------------------------------------------ +#$Date: 2015-01-27 21:58:39 +0200 (Tue, 27 Jan 2015) $ +#$Revision: 130149 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/1/01/10/1011099.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/ +# +# All data on this site have been placed in the public domain by the +# contributors. +# +data_1011099 +loop_ +_publ_author_name +'Brager, A' +_publ_section_title +; +An X-ray examination of titanium nitride III +; +_journal_coden_ASTM ACPYAR +_journal_name_full 'Acta Physicochimica (USSR)' +_journal_page_first 617 +_journal_page_last 632 +_journal_volume 9 +_journal_year 1939 +_chemical_compound_source 'synthetic at 3273 K' +_chemical_formula_structural 'Ti N' +_chemical_formula_sum 'N Ti' +_chemical_name_mineral Osbornite +_chemical_name_systematic 'Titanium(III) nitride' +_space_group_IT_number 225 +_symmetry_cell_setting cubic +_symmetry_Int_Tables_number 225 +_symmetry_space_group_name_Hall '-F 4 2 3' +_symmetry_space_group_name_H-M 'F m -3 m' +_cell_angle_alpha 90 +_cell_angle_beta 90 +_cell_angle_gamma 90 +_cell_formula_units_Z 4 +_cell_length_a 4.244 +_cell_length_b 4.244 +_cell_length_c 4.244 +_cell_volume 76.4 +_exptl_crystal_density_meas 5.1 +_cod_database_code 1011099 +loop_ +_symmetry_equiv_pos_as_xyz +x,y,z +y,z,x +z,x,y +x,z,y +y,x,z +z,y,x +x,-y,-z +y,-z,-x +z,-x,-y +x,-z,-y +y,-x,-z +z,-y,-x +-x,y,-z +-y,z,-x +-z,x,-y +-x,z,-y +-y,x,-z +-z,y,-x +-x,-y,z +-y,-z,x +-z,-x,y +-x,-z,y +-y,-x,z +-z,-y,x +-x,-y,-z +-y,-z,-x +-z,-x,-y +-x,-z,-y +-y,-x,-z +-z,-y,-x +-x,y,z +-y,z,x +-z,x,y +-x,z,y +-y,x,z +-z,y,x +x,-y,z +y,-z,x +z,-x,y +x,-z,y +y,-x,z +z,-y,x +x,y,-z +y,z,-x +z,x,-y +x,z,-y +y,x,-z +z,y,-x +x,1/2+y,1/2+z +1/2+x,y,1/2+z +1/2+x,1/2+y,z +y,1/2+z,1/2+x +1/2+y,z,1/2+x +1/2+y,1/2+z,x +z,1/2+x,1/2+y +1/2+z,x,1/2+y +1/2+z,1/2+x,y 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+1/2+x,1/2+z,-y +y,1/2+x,1/2-z +1/2+y,x,1/2-z +1/2+y,1/2+x,-z +z,1/2+y,1/2-x +1/2+z,y,1/2-x +1/2+z,1/2+y,-x +loop_ +_atom_site_label +_atom_site_type_symbol +_atom_site_symmetry_multiplicity +_atom_site_Wyckoff_symbol +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_occupancy +_atom_site_attached_hydrogens +_atom_site_calc_flag +Ti1 Ti3+ 4 a 0. 0. 0. 1. 0 d +N1 N3- 4 b 0.5 0.5 0.5 1. 0 d +loop_ +_atom_type_symbol +_atom_type_oxidation_number +Ti3+ 3.000 +N3- -3.000 diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/sulfates/H4SO5.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/sulfates/H4SO5.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/sulfates/H4SO5.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/sulfates/H4SO5.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,205 @@ +#------------------------------------------------------------------------------ +#$Date: 2017-10-13 03:08:28 +0300 (Fri, 13 Oct 2017) $ +#$Revision: 201955 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/2/00/56/2005681.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/. The original data for this entry +# were provided by IUCr Journals, http://journals.iucr.org/. +# +# The file may be used within the scientific community so long as +# proper attribution is given to the journal article from which the +# data were obtained. +# +data_2005681 +loop_ +_publ_author_name +'Kemnitz, E.' +'Werner, C.' +'Trojanov, S.' +_publ_section_title +; + Reinvestigation of Crystalline Sulfuric Acid and Oxonium + Hydrogensulfate +; +_journal_issue 11 +_journal_name_full 'Acta Crystallographica Section C' +_journal_page_first 2665 +_journal_page_last 2668 +_journal_paper_doi 10.1107/S0108270196006749 +_journal_volume 52 +_journal_year 1996 +_chemical_formula_iupac '(H3 O)(H S O4)' +_chemical_formula_structural '(H3 O)(H S O4)' +_chemical_formula_sum 'H4 O5 S' +_chemical_formula_weight 116.09 +_chemical_melting_point 8.5 +_chemical_name_common 'sulfuric acid monohydrate' +_chemical_name_systematic 'oxonium hydrogen sulfate' +_space_group_IT_number 14 +_symmetry_cell_setting monoclinic +_symmetry_space_group_name_Hall '-P 2ybc' +_symmetry_space_group_name_H-M 'P 1 21/c 1' +_audit_creation_method SHELXL +_cell_angle_alpha 90. +_cell_angle_beta 106.18(3) +_cell_angle_gamma 90. +_cell_formula_units_Z 4 +_cell_length_a 7.0770(10) +_cell_length_b 6.9550(10) +_cell_length_c 8.150(2) +_cell_measurement_reflns_used 24 +_cell_measurement_temperature 160(2) +_cell_measurement_theta_max 12.5 +_cell_measurement_theta_min 9 +_cell_volume 385.26(14) +_computing_structure_refinement SHELXL-93 +_computing_structure_solution 'SHELXS-86 (Sheldrick, 1985)' +_diffrn_ambient_temperature 160(2) +_diffrn_measurement_device 'Stoe-STADI four-circle' +_diffrn_measurement_method \q-2\q +_diffrn_radiation_monochromator graphite +_diffrn_radiation_source 'fine-focus sealed tube' +_diffrn_radiation_type MoK\a +_diffrn_radiation_wavelength 0.71073 +_diffrn_reflns_av_R_equivalents 0.0000 +_diffrn_reflns_av_sigmaI/netI 0.0091 +_diffrn_reflns_limit_h_max 12 +_diffrn_reflns_limit_h_min -12 +_diffrn_reflns_limit_k_max 12 +_diffrn_reflns_limit_k_min 0 +_diffrn_reflns_limit_l_max 14 +_diffrn_reflns_limit_l_min 0 +_diffrn_reflns_number 2384 +_diffrn_reflns_theta_max 40 +_diffrn_reflns_theta_min 3.00 +_diffrn_standards_decay_% 6.2 +_diffrn_standards_interval_time 150 +_diffrn_standards_number 3 +_exptl_absorpt_coefficient_mu 0.724 +_exptl_absorpt_correction_type none +_exptl_crystal_colour colourless +_exptl_crystal_density_diffrn 2.002 +_exptl_crystal_density_method 'not measured' +_exptl_crystal_description Irregular +_exptl_crystal_F_000 240 +_exptl_crystal_size_max 1.0 +_exptl_crystal_size_mid 0.8 +_exptl_crystal_size_min 0.5 +_refine_diff_density_max 1.097 +_refine_diff_density_min -1.248 +_refine_ls_extinction_coef 3.25(9) +_refine_ls_extinction_method SHELXL93 +_refine_ls_goodness_of_fit_all 1.126 +_refine_ls_goodness_of_fit_obs 1.145 +_refine_ls_hydrogen_treatment 'refall isotropically' +_refine_ls_matrix_type full +_refine_ls_number_parameters 72 +_refine_ls_number_reflns 2364 +_refine_ls_number_restraints 0 +_refine_ls_restrained_S_all 1.394 +_refine_ls_restrained_S_obs 1.145 +_refine_ls_R_factor_all 0.0374 +_refine_ls_R_factor_obs 0.0332 +_refine_ls_shift/esd_max 0.073 +_refine_ls_shift/esd_mean 0.012 +_refine_ls_structure_factor_coef Fsqd +_refine_ls_weighting_scheme +; +calc w = 1/[\s^2^(F~o~^2^) + (0.0604P)^2^ + 0.0491P] +where P = (F~o~^2^ + 2F~c~^2^)/3 +; +_refine_ls_wR_factor_all 0.1075 +_refine_ls_wR_factor_obs 0.0858 +_reflns_number_observed 2224 +_reflns_number_total 2384 +_reflns_observed_criterion >2sigma(I) +_cod_data_source_file sk1004.cif +_cod_data_source_block II +_cod_original_cell_volume 385.26(12) +_cod_original_sg_symbol_H-M 'P 21/c' +_cod_database_code 2005681 +loop_ +_symmetry_equiv_pos_as_xyz +'x, y, z' +'-x, y+1/2, -z+1/2' +'-x, -y, -z' +'x, -y-1/2, z-1/2' +loop_ +_atom_site_aniso_label +_atom_site_aniso_U_11 +_atom_site_aniso_U_22 +_atom_site_aniso_U_33 +_atom_site_aniso_U_12 +_atom_site_aniso_U_13 +_atom_site_aniso_U_23 +S1 0.01426(10) 0.00903(9) 0.00854(9) -0.00009(4) 0.00126(5) 0.00023(3) +O1 0.0219(2) 0.0125(2) 0.0088(2) -0.00061(15) 0.00135(14) 0.00179(13) +O2 0.0188(2) 0.0113(2) 0.0185(2) 0.0032(2) 0.0009(2) -0.0023(2) +O3 0.0216(2) 0.0147(2) 0.0114(2) -0.0005(2) 0.00259(14) -0.00453(14) +O4 0.0162(2) 0.0221(3) 0.0164(2) -0.0030(2) 0.0022(2) 0.0068(2) +O5 0.0181(2) 0.0122(2) 0.0153(2) -0.00073(15) 0.0017(2) 0.00349(15) +loop_ +_atom_site_label +_atom_site_occupancy +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_U_iso_or_equiv +_atom_site_thermal_displace_type +_atom_site_calc_flag +_atom_site_type_symbol +S1 1 0.75032(2) 0.15816(2) 0.04183(2) 0.01100(8) Uani d S +O1 1 0.82689(8) 0.06899(8) 0.21041(6) 0.01500(10) Uani d O +O2 1 0.61382(8) 0.31432(8) 0.04153(8) 0.01707(11) Uani d O +O3 1 0.66823(8) 0.01651(8) -0.08874(6) 0.01629(11) Uani d O +O4 1 0.93770(8) 0.24719(9) 0.00759(7) 0.01874(12) Uani d O +O5 1 0.72575(8) 0.69970(8) 0.17478(7) 0.01579(11) Uani d O +H2 1 0.6083(27) 0.7074(31) 0.1053(28) 0.036(5) Uiso d H +H1 1 0.8975(25) 0.3144(25) -0.0780(24) 0.024(4) Uiso d H +H3 1 0.7124(26) 0.6254(32) 0.2663(24) 0.034(5) Uiso d H +H4 1 0.7562(25) 0.8179(28) 0.1927(24) 0.028(4) Uiso d H +loop_ +_atom_type_symbol +_atom_type_description +_atom_type_scat_dispersion_real +_atom_type_scat_dispersion_imag +_atom_type_scat_source +O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' +H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' +S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' +loop_ +_geom_angle_atom_site_label_1 +_geom_angle_atom_site_label_2 +_geom_angle_atom_site_label_3 +_geom_angle +_geom_angle_publ_flag +O3 S1 O2 112.14(4) no +O3 S1 O1 111.63(4) no +O2 S1 O1 112.93(4) no +O3 S1 O4 109.03(4) no +O2 S1 O4 107.54(4) no +O1 S1 O4 103.02(4) no +S1 O4 H1 105.5(13) no +H2 O5 H3 105.3(18) no +H2 O5 H4 101.7(17) no +H3 O5 H4 118.3(18) no +loop_ +_geom_bond_atom_site_label_1 +_geom_bond_atom_site_label_2 +_geom_bond_distance +_geom_bond_publ_flag +S1 O3 1.4478(6) no +S1 O2 1.4531(6) no +S1 O1 1.4666(6) no +S1 O4 1.5576(6) no +O4 H1 0.82(2) no +O5 H2 0.87(2) no +O5 H3 0.93(2) no +O5 H4 0.85(2) no +loop_ +_cod_related_entry_id +_cod_related_entry_database +_cod_related_entry_code +1 ChemSpider 10662067 diff -urN '--exclude=CVS' '--exclude=.cvsignore' '--exclude=.svn' '--exclude=.svnignore' old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/sulfates/Na2SO4.cif new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/sulfates/Na2SO4.cif --- old/crystals-c3e2468fa42360499f0e73d215bddfe2245258aa/sulfates/Na2SO4.cif 1970-01-01 01:00:00.000000000 +0100 +++ new/crystals-4b39c77ec1043cfb7a73e7b5dd51e24d36a95c44/sulfates/Na2SO4.cif 2021-10-07 23:16:24.000000000 +0200 @@ -0,0 +1,72 @@ +#------------------------------------------------------------------------------ +#$Date: 2015-01-27 21:58:39 +0200 (Tue, 27 Jan 2015) $ +#$Revision: 130149 $ +#$URL: file:///home/coder/svn-repositories/cod/cif/1/01/05/1010522.cif $ +#------------------------------------------------------------------------------ +# +# This file is available in the Crystallography Open Database (COD), +# http://www.crystallography.net/ +# +# All data on this site have been placed in the public domain by the +# contributors. +# +data_1010522 +loop_ +_publ_author_name +'Frevel, L K' +_publ_section_title 'The Crystal Structure of Sodium Sulfate III' +_journal_coden_ASTM JCPSA6 +_journal_name_full 'Journal of Chemical Physics' +_journal_page_first 290 +_journal_page_last 290 +_journal_volume 8 +_journal_year 1940 +_chemical_formula_structural 'Na2 S O4' +_chemical_formula_sum 'Na2 O4 S' +_chemical_name_systematic 'Sodium sulfate - III' +_space_group_IT_number 52 +_symmetry_cell_setting orthorhombic +_symmetry_Int_Tables_number 52 +_symmetry_space_group_name_Hall '-P 2n 2b' +_symmetry_space_group_name_H-M 'P b n n' +_cell_angle_alpha 90 +_cell_angle_beta 90 +_cell_angle_gamma 90 +_cell_formula_units_Z 4 +_cell_length_a 5.59(2) +_cell_length_b 8.93(2) +_cell_length_c 6.98(2) +_cell_volume 348.4 +_cod_database_code 1010522 +loop_ +_symmetry_equiv_pos_as_xyz +x,y,z +x,1/2-y,-z +1/2-x,y,1/2-z +1/2-x,1/2-y,1/2+z +-x,-y,-z +-x,1/2+y,z +1/2+x,-y,1/2+z +1/2+x,1/2+y,1/2-z +loop_ +_atom_site_label +_atom_site_type_symbol +_atom_site_symmetry_multiplicity +_atom_site_Wyckoff_symbol +_atom_site_fract_x +_atom_site_fract_y +_atom_site_fract_z +_atom_site_occupancy +_atom_site_attached_hydrogens +_atom_site_calc_flag +S1 S6+ 4 d 0.25 0.097(1) 0.25 1. 0 d +Na1 Na1+ 4 d 0.25 0.435(10) 0.25 1. 0 d +Na2 Na1+ 4 c -0.25 0.25 0. 1. 0 d +O1 O2- 8 e 0.030(2) 0.197(3) 0.25 1. 0 d +O2 O2- 8 e 0.25 0. 0.072(2) 1. 0 d +loop_ +_atom_type_symbol +_atom_type_oxidation_number +S6+ 6.000 +Na1+ 1.000 +O2- -2.000