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here is the log from the commit of package python-lmfit for openSUSE:Factory
checked in at 2021-12-30 15:55:41
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/python-lmfit (Old)
and /work/SRC/openSUSE:Factory/.python-lmfit.new.1896 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-lmfit"
Thu Dec 30 15:55:41 2021 rev:3 rq:943211 version:1.0.3
Changes:
--------
--- /work/SRC/openSUSE:Factory/python-lmfit/python-lmfit.changes
2021-02-19 23:45:13.807361322 +0100
+++ /work/SRC/openSUSE:Factory/.python-lmfit.new.1896/python-lmfit.changes
2021-12-30 15:56:07.908687447 +0100
@@ -1,0 +2,66 @@
+Tue Dec 28 19:11:00 UTC 2021 - Ben Greiner <c...@bnavigator.de>
+
+- Update to v1.0.3
+ **Potentially breaking change:**
+ * argument ``x`` is now required for the ``guess`` method of
+ Models (Issue #747; PR #748)
+
+ To get reasonable estimates for starting values one should
+ always supply both ``x`` and ``y`` values; in some cases it
+ would work when only providing ``data`` (i.e., y-values). With
+ the change above, ``x`` is now required in the ``guess`` method
+ call, so scripts might need to be updated to explicitly supply
+ ``x``.
+ **Bug fixes/enhancements:**
+ * do not overwrite user-specified figure titles in Model.plot()
+ functions and allow setting with ``title`` keyword argument (PR
+ #711)
+ * preserve Parameters subclass in deepcopy (@jenshnielsen; PR
+ #719)
+ * coerce ``data`` and ``indepdent_vars`` to NumPy array with
+ ``dtype=float64`` or ``dtype=complex128`` where applicable
+ (Issues #723 and #728)
+ * fix collision between parameter names in built-in models and
+ user-specified parameters (Issue #710 and PR #732)
+ * correct error message in PolynomialModel (@kremeyer; PR #737)
+ * improved handling of altered JSON data (Issue #739; PR #740,
+ reported by Matthew Giammar)
+ * map ``max_nfev`` to ``maxiter`` when using
+ ``differential_evolution`` (PR #749, reported by Olivier B.)
+ * correct use of noise versus experimental uncertainty in the
+ documentation (PR #751, reported by Andr??s Zelcer)
+ * specify return type of ``eval`` method more precisely and allow
+ for plotting of (Complex)ConstantModel by coercing their
+ ``float``, ``int``, or ``complex`` return value to a
+ ``numpy.ndarray`` (Issue #684 and PR #754)
+ * fix ``dho`` (Damped Harmonic Oscillator) lineshape (PR #755;
+ @rayosborn)
+ * reset ``Minimizer._abort`` to ``False`` before starting a new
+ fit (Issue #756 and PR #757; @azelcer)
+ * fix typo in ``guess_from_peak2d`` (@ivan-usovl; PR #758)
+ **Various:**
+ * update asteval dependency to >= 0.9.22 to avoid
+ DeprecationWarnings from NumPy v1.20.0 (PR #707)
+ * remove incorrectly spelled ``DonaichModel`` and ``donaich``
+ lineshape, deprecated in version 1.0.1 (PR #707)
+ * remove occurrences of OrderedDict throughout the code; dict is
+ order-preserving since Python 3.6 (PR #713)
+ * update the contributing instructions (PR #718; @martin-majlis)
+ * (again) defer import of matplotlib to when it is needed
+ (@zobristnicholas; PR #721)
+ * fix description of ``name`` argument in ``Parameters.add``
+ (@kristianmeyerr; PR #725)
+ * update dependencies, make sure a functional development
+ environment is installed on Windows (Issue #712)
+ * use ``setuptools_scm`` for version info instead of
+ ``versioneer`` (PR #729)
+ * transition to using ``f-strings`` (PR #730)
+ * mark ``test_manypeaks_speed.py`` as flaky to avoid intermittent
+ test failures (repeat up to 5 times; PR #745)
+ * update scipy dependency to >= 1.14.0 (PR #751)
+ * improvement to output of examples in sphinx-gallery and use
+ higher resolution figures (PR #753)
+ * remove deprecated functions ``lmfit.printfuncs.report_errors``
+ and ``asteval`` argument in ``Parameters`` class (PR #759)
+
+-------------------------------------------------------------------
Old:
----
lmfit-1.0.2.tar.gz
New:
----
lmfit-1.0.3.tar.gz
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ python-lmfit.spec ++++++
--- /var/tmp/diff_new_pack.N3iYhl/_old 2021-12-30 15:56:08.388687817 +0100
+++ /var/tmp/diff_new_pack.N3iYhl/_new 2021-12-30 15:56:08.392687820 +0100
@@ -16,20 +16,21 @@
#
-%{?!python_module:%define python_module() python-%{**} python3-%{**}}
+%{?!python_module:%define python_module() python3-%{**}}
%define skip_python2 1
%define skip_python36 1
Name: python-lmfit
-Version: 1.0.2
+Version: 1.0.3
Release: 0
Summary: Least-Squares Minimization with Bounds and Constraints
-License: MIT AND BSD-3-Clause
+License: BSD-3-Clause AND MIT
URL: https://lmfit.github.io/lmfit-py/
Source:
https://files.pythonhosted.org/packages/source/l/lmfit/lmfit-%{version}.tar.gz
+BuildRequires: %{python_module setuptools_scm}
BuildRequires: %{python_module setuptools}
BuildRequires: fdupes
BuildRequires: python-rpm-macros
-Requires: python-asteval >= 0.9.21
+Requires: python-asteval >= 0.9.22
Requires: python-numpy >= 1.18
Requires: python-scipy >= 1.3
Recommends: python-dill
@@ -39,10 +40,10 @@
Recommends: python-uncertainties >= 3.0.1
BuildArch: noarch
# SECTION test requirements
-BuildRequires: %{python_module asteval >= 0.9.21}
+BuildRequires: %{python_module asteval >= 0.9.22}
BuildRequires: %{python_module numpy >= 1.18}
BuildRequires: %{python_module pytest}
-BuildRequires: %{python_module scipy >= 1.3}
+BuildRequires: %{python_module scipy >= 1.4}
BuildRequires: %{python_module uncertainties >= 3.0.1}
# /SECTION
%python_subpackages
@@ -69,6 +70,8 @@
%prep
%setup -q -n lmfit-%{version}
sed -i -e '/^#!\//, 1d' lmfit/jsonutils.py
+# only coverage related pytest flags here. remove
+sed -i '/addopts/d' setup.cfg
%build
%python_build
@@ -78,16 +81,16 @@
%python_expand %fdupes %{buildroot}%{$python_sitelib}
%check
-%{python_exec -c "import sys, lmfit, numpy, scipy, asteval, uncertainties, six;
+%{python_exec -c "import sys, lmfit, numpy, scipy, asteval, uncertainties;
print('Python: {}\n\n'
-'lmfit: {}, scipy: {}, numpy: {}, asteval: {}, uncertainties: {}, six:
{}'.format(
+'lmfit: {}, scipy: {}, numpy: {}, asteval: {}, uncertainties: {}'.format(
sys.version,
lmfit.__version__,
scipy.__version__,
numpy.__version__,
asteval.__version__,
- uncertainties.__version__,
- six.__version__))"}
+ uncertainties.__version__
+))"}
cat << 'EOF' >> testexample.py
import numpy as np
@@ -121,10 +124,16 @@
%python_exec testexample.py
-# We don't care about speed, and test_itercb is architecture-specific
-# test_model_nan_policy - fails on non x86_64
-# test_shgo_scipy_vs_lmfit_2 - fails on non x86_64
-%pytest -k 'not speed and not (test_model_nan_policy or
test_shgo_scipy_vs_lmfit_2)'
+# We don't care about speed
+donttest="speed"
+# these tests fail on non x86_64. Upstream does not care:
https://github.com/lmfit/lmfit-py/issues/692
+donttest+=" or test_model_nan_policy"
+donttest+=" or test_shgo_scipy_vs_lmfit_2"
+# fails on 32-bit
+if [ $(getconf LONG_BIT) -ne 64 ]; then
+ donttest+=" or (test_itercb_minimizer_class and leastsq and False)"
+fi
+%pytest -k "not ($donttest)"
%files %{python_files}
%doc README.rst THANKS.txt
++++++ lmfit-1.0.2.tar.gz -> lmfit-1.0.3.tar.gz ++++++
++++ 9048 lines of diff (skipped)
