Script 'mail_helper' called by obssrc
Hello community,
here is the log from the commit of package bowtie2 for openSUSE:Factory checked
in at 2023-10-20 23:19:00
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/bowtie2 (Old)
and /work/SRC/openSUSE:Factory/.bowtie2.new.1945 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "bowtie2"
Fri Oct 20 23:19:00 2023 rev:11 rq:1119256 version:2.5.2
Changes:
--------
--- /work/SRC/openSUSE:Factory/bowtie2/bowtie2.changes 2023-01-19
16:44:14.701781736 +0100
+++ /work/SRC/openSUSE:Factory/.bowtie2.new.1945/bowtie2.changes
2023-10-20 23:22:17.694621157 +0200
@@ -1,0 +2,13 @@
+Thu Oct 19 12:32:32 UTC 2023 - Atri Bhattacharya <badshah...@gmail.com>
+
+- Update to version 2.5.2:
+ * Fixed an issue preventing bowtie2 from utilizing the specified
+ number of CPU cores.
+ * Fixed an issue causing bowtie2 to segfault while parsing
+ interleaved reads.
+ * Overhauled the FASTQ parser with better tolerance for empty
+ lines.
+- Update simde to version 0.7.6.
+- Allow building with LTO, do not set _lto_cflags to %{nil}.
+
+-------------------------------------------------------------------
Old:
----
bowtie2-2.5.1.tar.gz
simde-0.7.2.tar.gz
New:
----
bowtie2-2.5.2.tar.gz
simde-0.7.6.tar.gz
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ bowtie2.spec ++++++
--- /var/tmp/diff_new_pack.sAqxyF/_old 2023-10-20 23:22:18.334644508 +0200
+++ /var/tmp/diff_new_pack.sAqxyF/_new 2023-10-20 23:22:18.334644508 +0200
@@ -16,12 +16,11 @@
#
-%global simde_version 0.7.2
+%global simde_version 0.7.6
%ifarch aarch64
-%define _lto_cflags %{nil}
%endif
Name: bowtie2
-Version: 2.5.1
+Version: 2.5.2
Release: 0
Summary: Fast and memory-efficient short read aligner
License: GPL-3.0-only
++++++ bowtie2-2.5.1.tar.gz -> bowtie2-2.5.2.tar.gz ++++++
/work/SRC/openSUSE:Factory/bowtie2/bowtie2-2.5.1.tar.gz
/work/SRC/openSUSE:Factory/.bowtie2.new.1945/bowtie2-2.5.2.tar.gz differ: char
13, line 1
++++++ simde-0.7.2.tar.gz -> simde-0.7.6.tar.gz ++++++
++++ 314855 lines of diff (skipped)
