See <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/82/display/redirect?page=changes>
Changes: [wcn] Fix golint issues [lcwik] [BEAM-3249] Allow for re-use of dependencies within other projects by [robertwb] Optimize reshuffle. [robertwb] Add PipelineRunner.run_async for non-blocking execution. ------------------------------------------ Started by timer [EnvInject] - Loading node environment variables. Building remotely on beam7 (beam) in workspace <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/> > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/apache/beam.git # timeout=10 Fetching upstream changes from https://github.com/apache/beam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/apache/beam.git > +refs/heads/*:refs/remotes/origin/* > +refs/pull/${ghprbPullId}/*:refs/remotes/origin/pr/${ghprbPullId}/* > git rev-parse origin/master^{commit} # timeout=10 Checking out Revision eb0bbe96ea44a99f5a89f0f4ce94910ed59b1132 (origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f eb0bbe96ea44a99f5a89f0f4ce94910ed59b1132 Commit message: "[BEAM-3249] Allow for re-use of dependencies within other projects by placing them within build_rules.gradle" > git rev-list --no-walk 716a269aa76eacc7b4e2e911af8eb878c4364abe # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 [EnvInject] - Executing scripts and injecting environment variables after the SCM step. [EnvInject] - Injecting as environment variables the properties content SPARK_LOCAL_IP=127.0.0.1 [EnvInject] - Variables injected successfully. [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins4334970318306757906.sh + gcloud container clusters get-credentials io-datastores --zone=us-central1-a --verbosity=debug DEBUG: Running [gcloud.container.clusters.get-credentials] with arguments: [--verbosity: "debug", --zone: "us-central1-a", NAME: "io-datastores"] Fetching cluster endpoint and auth data. DEBUG: Saved kubeconfig to /home/jenkins/.kube/config kubeconfig entry generated for io-datastores. INFO: Display format "default". DEBUG: SDK update checks are disabled. [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins2979774313946445436.sh + cp /home/jenkins/.kube/config <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/config-hadoopinputformatioit-1522440077237> [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins6901317439540893031.sh + kubectl --kubeconfig=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/config-hadoopinputformatioit-1522440077237> create namespace hadoopinputformatioit-1522440077237 namespace "hadoopinputformatioit-1522440077237" created [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins950853172208313669.sh ++ kubectl config current-context + kubectl --kubeconfig=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/config-hadoopinputformatioit-1522440077237> config set-context gke_apache-beam-testing_us-central1-a_io-datastores --namespace=hadoopinputformatioit-1522440077237 Context "gke_apache-beam-testing_us-central1-a_io-datastores" modified. [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins2291364277234873844.sh + rm -rf PerfKitBenchmarker [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins8447858891051549326.sh + rm -rf .env [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins1640076266248195030.sh + virtualenv .env --system-site-packages New python executable in <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/.env/bin/python> Installing setuptools, pip, wheel...done. [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins2168302010614545702.sh + .env/bin/pip install --upgrade setuptools pip Requirement already up-to-date: setuptools in ./.env/lib/python2.7/site-packages Requirement already up-to-date: pip in ./.env/lib/python2.7/site-packages [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins2590326013607989893.sh + git clone https://github.com/GoogleCloudPlatform/PerfKitBenchmarker.git Cloning into 'PerfKitBenchmarker'... [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins5221843734119482804.sh + .env/bin/pip install -r PerfKitBenchmarker/requirements.txt Requirement already satisfied: absl-py in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: setuptools in ./.env/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 16)) Requirement already satisfied: colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 18)) Requirement already satisfied: futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 19)) Requirement already satisfied: PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 20)) Requirement already satisfied: pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 21)) Collecting numpy==1.13.3 (from -r PerfKitBenchmarker/requirements.txt (line 22)) Using cached numpy-1.13.3-cp27-cp27mu-manylinux1_x86_64.whl Requirement already satisfied: functools32 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 23)) Requirement already satisfied: contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 24)) Requirement already satisfied: pywinrm in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: six in /home/jenkins/.local/lib/python2.7/site-packages (from absl-py->-r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: MarkupSafe>=0.23 in /usr/local/lib/python2.7/dist-packages (from jinja2>=2.7->-r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: colorama; extra == "windows" in /usr/lib/python2.7/dist-packages (from colorlog[windows]==2.6.0->-r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: xmltodict in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests-ntlm>=0.3.0 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests>=2.9.1 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ntlm-auth>=1.0.2 in 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requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cffi>=1.7; platform_python_implementation != "PyPy" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: enum34; python_version < "3" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: asn1crypto>=0.21.0 in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ipaddress; python_version < "3" in /usr/local/lib/python2.7/dist-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: pycparser in /home/jenkins/.local/lib/python2.7/site-packages (from cffi>=1.7; platform_python_implementation != "PyPy"->cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Installing collected packages: numpy Found existing installation: numpy 1.12.1 Not uninstalling numpy at /home/jenkins/.local/lib/python2.7/site-packages, outside environment <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/.env> Successfully installed numpy-1.13.3 [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins5892557746772050588.sh + .env/bin/pip install -e 'src/sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/src/sdks/python> Requirement already satisfied: avro<2.0.0,>=1.8.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: crcmod<2.0,>=1.7 in /usr/lib/python2.7/dist-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Collecting grpcio<2,>=1.8 (from apache-beam==2.5.0.dev0) Using cached grpcio-1.10.0-cp27-cp27mu-manylinux1_x86_64.whl Collecting hdfs<3.0.0,>=2.1.0 (from apache-beam==2.5.0.dev0) Requirement already satisfied: httplib2<0.10,>=0.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: mock<3.0.0,>=1.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: oauth2client<5,>=2.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: protobuf<4,>=3.5.0.post1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Collecting pytz>=2018.3 (from apache-beam==2.5.0.dev0) Using cached pytz-2018.3-py2.py3-none-any.whl Requirement already 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googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: proto-google-cloud-pubsub-v1==0.15.4 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: google-cloud-bigquery==0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Collecting nose>=1.3.7 (from apache-beam==2.5.0.dev0) Using cached nose-1.3.7-py2-none-any.whl Requirement already satisfied: pyhamcrest<2.0,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio<2,>=1.8->apache-beam==2.5.0.dev0) Requirement already satisfied: requests>=2.7.0 in /home/jenkins/.local/lib/python2.7/site-packages (from hdfs<3.0.0,>=2.1.0->apache-beam==2.5.0.dev0) Requirement already satisfied: docopt in /usr/local/lib/python2.7/dist-packages (from hdfs<3.0.0,>=2.1.0->apache-beam==2.5.0.dev0) Requirement already satisfied: funcsigs>=1; python_version < "3.3" in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.5.0.dev0) Requirement already satisfied: pbr>=0.11 in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.5.0.dev0) Requirement already satisfied: pyasn1>=0.1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<5,>=2.0.1->apache-beam==2.5.0.dev0) Requirement already satisfied: pyasn1-modules>=0.0.5 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<5,>=2.0.1->apache-beam==2.5.0.dev0) Requirement already satisfied: rsa>=3.1.4 in /home/jenkins/.local/lib/python2.7/site-packages (from 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future<0.17dev,>=0.16.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.5.0.dev0) Requirement already satisfied: ply==3.8 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.5.0.dev0) Installing collected packages: grpcio, hdfs, pytz, nose, apache-beam Found existing installation: grpcio 1.4.0 Not uninstalling grpcio at /home/jenkins/.local/lib/python2.7/site-packages, outside environment <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/.env> Found existing installation: apache-beam 2.5.0.dev0 Not uninstalling apache-beam at /home/jenkins/jenkins-slave/workspace/beam_PerformanceTests_Python/src/sdks/python, outside environment <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/.env> Running setup.py develop for apache-beam Successfully installed apache-beam grpcio-1.10.0 hdfs-2.1.0 nose-1.3.7 pytz-2018.3 [beam_PerformanceTests_HadoopInputFormat] $ /bin/bash -xe /tmp/jenkins111058739732019161.sh + .env/bin/python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.hadoopinputformatioit_pkb_results --temp_dir=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/> --official=true --kubeconfig=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/config-hadoopinputformatioit-1522440077237> --beam_it_timeout=1200 --benchmarks=beam_integration_benchmark --beam_it_profile=io-it --beam_prebuilt=true --beam_sdk=java --beam_it_module=sdks/java/io/hadoop-input-format --beam_it_class=org.apache.beam.sdk.io.hadoop.inputformat.HadoopInputFormatIOIT '--beam_it_options=[--tempRoot=gs://temp-storage-for-perf-tests,--project=apache-beam-testing,--postgresPort=5432,--numberOfRecords=600000]' --beam_kubernetes_scripts=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/src/.test-infra/kubernetes/postgres/postgres-service-for-local-dev.yml> --beam_options_config_file=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/src/.test-infra/kubernetes/postgres/pkb-config-local.yml> 2018-03-31 00:08:37,027 be8d4bcf MainThread INFO Verbose logging to: <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/runs/be8d4bcf/pkb.log> 2018-03-31 00:08:37,028 be8d4bcf MainThread INFO PerfKitBenchmarker version: v1.12.0-454-g8b295f3 2018-03-31 00:08:37,029 be8d4bcf MainThread INFO Flag values: --beam_it_class=org.apache.beam.sdk.io.hadoop.inputformat.HadoopInputFormatIOIT --beam_it_timeout=1200 --beam_sdk=java --temp_dir=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/> --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --beam_it_options=[--tempRoot=gs://temp-storage-for-perf-tests,--project=apache-beam-testing,--postgresPort=5432,--numberOfRecords=600000] --beam_prebuilt --kubeconfig=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/config-hadoopinputformatioit-1522440077237> --project=apache-beam-testing --beam_kubernetes_scripts=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/src/.test-infra/kubernetes/postgres/postgres-service-for-local-dev.yml> --bigquery_table=beam_performance.hadoopinputformatioit_pkb_results --official --beam_it_module=sdks/java/io/hadoop-input-format --dpb_log_level=INFO --beam_options_config_file=<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/src/.test-infra/kubernetes/postgres/pkb-config-local.yml> --beam_it_profile=io-it --benchmarks=beam_integration_benchmark 2018-03-31 00:08:37,233 be8d4bcf MainThread WARNING The key "flags" was not in the default config, but was in user overrides. This may indicate a typo. 2018-03-31 00:08:37,234 be8d4bcf MainThread INFO Initializing the edw service decoder 2018-03-31 00:08:37,306 be8d4bcf MainThread INFO Benchmark run statuses: ---------------------------------------------------------------------------------- Name UID Status Failed Substatus ---------------------------------------------------------------------------------- beam_integration_benchmark beam_integration_benchmark0 SKIPPED ---------------------------------------------------------------------------------- Success rate: 0.00% (0/1) 2018-03-31 00:08:37,306 be8d4bcf MainThread INFO Complete logs can be found at: <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/runs/be8d4bcf/pkb.log> 2018-03-31 00:08:37,306 be8d4bcf MainThread INFO Completion statuses can be found at: <https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/runs/be8d4bcf/completion_statuses.json> Traceback (most recent call last): File "PerfKitBenchmarker/pkb.py", line 21, in <module> sys.exit(Main()) File "<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 952, in Main return RunBenchmarks() File "<https://builds.apache.org/job/beam_PerformanceTests_HadoopInputFormat/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 868, in RunBenchmarks if FLAGS.run_with_pdb and FLAGS.run_processes == 1: File "/home/jenkins/.local/lib/python2.7/site-packages/absl/flags/_flagvalues.py", line 477, in __getattr__ raise AttributeError(name) AttributeError: run_with_pdb Build step 'Execute shell' marked build as failure
