See <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/323/display/redirect?page=changes>
Changes: [chamikara] [BEAM-3213] MongodbIO performance test (#4859) ------------------------------------------ Started by timer [EnvInject] - Loading node environment variables. Building remotely on beam2 (beam) in workspace <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/> > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/apache/beam.git # timeout=10 Fetching upstream changes from https://github.com/apache/beam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/apache/beam.git > +refs/heads/*:refs/remotes/origin/* > +refs/pull/${ghprbPullId}/*:refs/remotes/origin/pr/${ghprbPullId}/* > git rev-parse origin/master^{commit} # timeout=10 Checking out Revision ecf9ee6ac336398530954456fcbd6b9baa0239a1 (origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f ecf9ee6ac336398530954456fcbd6b9baa0239a1 Commit message: "[BEAM-3213] MongodbIO performance test (#4859)" > git rev-list --no-walk 60327674fd738221030bcba0427c5a626c967648 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 [EnvInject] - Executing scripts and injecting environment variables after the SCM step. [EnvInject] - Injecting as environment variables the properties content SPARK_LOCAL_IP=127.0.0.1 [EnvInject] - Variables injected successfully. [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins7895274390594140629.sh + rm -rf PerfKitBenchmarker [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins8327565942857938108.sh + rm -rf .env [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins1262396725836581556.sh + virtualenv .env --system-site-packages New python executable in <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/.env/bin/python> Installing setuptools, pip, wheel...done. [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins5233844339052939839.sh + .env/bin/pip install --upgrade setuptools pip Requirement already up-to-date: setuptools in ./.env/lib/python2.7/site-packages (39.0.1) Requirement already up-to-date: pip in ./.env/lib/python2.7/site-packages (10.0.0b1) [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins1967130413956266591.sh + git clone https://github.com/GoogleCloudPlatform/PerfKitBenchmarker.git Cloning into 'PerfKitBenchmarker'... [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins137220124658293647.sh + .env/bin/pip install -r PerfKitBenchmarker/requirements.txt Requirement already satisfied: absl-py in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 14)) (0.1.3) Requirement already satisfied: jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 15)) (2.8) Requirement already satisfied: setuptools in ./.env/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 16)) (39.0.1) Requirement already satisfied: colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 17)) (2.6.0) Requirement already satisfied: blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 18)) (1.4) Requirement already satisfied: futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 19)) (3.1.1) Requirement already satisfied: PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 20)) (3.12) Requirement already satisfied: pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 21)) (0.7.2) Collecting numpy==1.13.3 (from -r PerfKitBenchmarker/requirements.txt (line 22)) Using cached numpy-1.13.3-cp27-cp27mu-manylinux1_x86_64.whl Requirement already satisfied: functools32 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 23)) (3.2.3.post2) Requirement already satisfied: contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 24)) (0.5.4) Requirement already satisfied: pywinrm in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 25)) (0.2.2) Requirement already satisfied: six in /home/jenkins/.local/lib/python2.7/site-packages (from absl-py->-r PerfKitBenchmarker/requirements.txt (line 14)) (1.10.0) Requirement already satisfied: MarkupSafe in /usr/local/lib/python2.7/dist-packages (from jinja2>=2.7->-r PerfKitBenchmarker/requirements.txt (line 15)) (0.23) Requirement already satisfied: colorama; extra == "windows" in /usr/lib/python2.7/dist-packages (from colorlog[windows]==2.6.0->-r PerfKitBenchmarker/requirements.txt (line 17)) (0.2.5) Requirement already satisfied: xmltodict in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (0.11.0) Requirement already satisfied: requests-ntlm>=0.3.0 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (1.1.0) Requirement already satisfied: requests>=2.9.1 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (2.18.1) Requirement already satisfied: ntlm-auth>=1.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (1.0.6) Requirement already satisfied: cryptography>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (2.1.2) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (2.5) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (1.21.1) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (3.0.4) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (2017.4.17) Requirement already satisfied: cffi>=1.7; platform_python_implementation != "PyPy" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (1.11.2) Requirement already satisfied: enum34; python_version < "3" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (1.1.6) Requirement already satisfied: asn1crypto>=0.21.0 in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (0.23.0) Requirement already satisfied: ipaddress; python_version < "3" in /usr/local/lib/python2.7/dist-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (1.0.19) Requirement already satisfied: pycparser in /home/jenkins/.local/lib/python2.7/site-packages (from cffi>=1.7; platform_python_implementation != "PyPy"->cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) (2.18) Installing collected packages: numpy Found existing installation: numpy 1.11.3 Not uninstalling numpy at /home/jenkins/.local/lib/python2.7/site-packages, outside environment <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/.env> Can't uninstall 'numpy'. No files were found to uninstall. Successfully installed numpy-1.13.3 [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins6040943788410879730.sh + .env/bin/pip install -e 'src/sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/src/sdks/python> Requirement already satisfied: avro<2.0.0,>=1.8.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) (1.8.2) Requirement already satisfied: crcmod<2.0,>=1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) (1.7) Requirement already satisfied: dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) (0.2.6) Collecting grpcio<2,>=1.8 (from apache-beam==2.5.0.dev0) Using cached grpcio-1.10.0-cp27-cp27mu-manylinux1_x86_64.whl Collecting hdfs<3.0.0,>=2.1.0 (from apache-beam==2.5.0.dev0) Requirement already satisfied: httplib2<0.10,>=0.8 in /home/jenkins/.local/lib/python2.7/site-packages (from 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apache-beam 2.5.0.dev0 requires oauth2client<5,>=2.0.1, which is not installed. apache-beam 2.5.0.dev0 requires protobuf<4,>=3.5.0.post1, which is not installed. apache-beam 2.5.0.dev0 requires pyvcf<0.7.0,>=0.6.8, which is not installed. apache-beam 2.5.0.dev0 requires pyyaml<4.0.0,>=3.12, which is not installed. apache-beam 2.5.0.dev0 requires six<1.12,>=1.9, which is not installed. apache-beam 2.5.0.dev0 requires typing<3.7.0,>=3.6.0, which is not installed. grpcio 1.10.0 requires enum34>=1.0.4, which is not installed. grpcio 1.10.0 requires futures>=2.2.0, which is not installed. grpcio 1.10.0 requires protobuf>=3.5.0.post1, which is not installed. grpcio 1.10.0 requires six>=1.5.2, which is not installed. Installing collected packages: grpcio, hdfs, pytz, nose, apache-beam Found existing installation: grpcio 1.3.5 Not uninstalling grpcio at /home/jenkins/.local/lib/python2.7/site-packages, outside environment <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/.env> Can't uninstall 'grpcio'. No files were found to uninstall. The scripts hdfscli and hdfscli-avro are installed in '<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/.env/bin'> which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. The scripts nosetests and nosetests-2.7 are installed in '<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/.env/bin'> which is not on PATH. Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location. Found existing installation: apache-beam 2.5.0.dev0 Not uninstalling apache-beam at /home/jenkins/jenkins-slave/workspace/beam_PerformanceTests_TextIOIT/src/sdks/python, outside environment <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/.env> Can't uninstall 'apache-beam'. No files were found to uninstall. Running setup.py develop for apache-beam Successfully installed apache-beam grpcio-1.10.0 hdfs-2.1.0 nose-1.3.7 pytz-2018.3 [beam_PerformanceTests_TFRecordIOIT] $ /bin/bash -xe /tmp/jenkins3236270537007311531.sh + .env/bin/python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.tfrecordioit_pkb_results --temp_dir=<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/> --official=true --benchmarks=beam_integration_benchmark --beam_it_timeout=1200 --beam_it_profile=io-it --beam_prebuilt=true --beam_sdk=java --beam_it_module=sdks/java/io/file-based-io-tests --beam_it_class=org.apache.beam.sdk.io.tfrecord.TFRecordIOIT '--beam_it_options=[--project=apache-beam-testing,--tempRoot=gs://temp-storage-for-perf-tests,--filenamePrefix=gs://temp-storage-for-perf-tests/beam_PerformanceTests_TFRecordIOIT/323/,--numberOfRecords=1000000]' '--beam_extra_mvn_properties=[filesystem=gcs]' 2018-04-02 06:01:25,686 ac42d5ac MainThread INFO Verbose logging to: <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/runs/ac42d5ac/pkb.log> 2018-04-02 06:01:25,686 ac42d5ac MainThread INFO PerfKitBenchmarker version: v1.12.0-454-g8b295f3 2018-04-02 06:01:25,687 ac42d5ac MainThread INFO Flag values: --beam_extra_mvn_properties=[filesystem=gcs] --beam_it_class=org.apache.beam.sdk.io.tfrecord.TFRecordIOIT --beam_it_timeout=1200 --beam_sdk=java --temp_dir=<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/> --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --beam_it_options=[--project=apache-beam-testing,--tempRoot=gs://temp-storage-for-perf-tests,--filenamePrefix=gs://temp-storage-for-perf-tests/beam_PerformanceTests_TFRecordIOIT/323/,--numberOfRecords=1000000] --beam_prebuilt --project=apache-beam-testing --bigquery_table=beam_performance.tfrecordioit_pkb_results --official --beam_it_module=sdks/java/io/file-based-io-tests --dpb_log_level=INFO --beam_it_profile=io-it --benchmarks=beam_integration_benchmark 2018-04-02 06:01:25,983 ac42d5ac MainThread WARNING The key "flags" was not in the default config, but was in user overrides. This may indicate a typo. 2018-04-02 06:01:25,983 ac42d5ac MainThread INFO Initializing the edw service decoder 2018-04-02 06:01:26,048 ac42d5ac MainThread INFO Benchmark run statuses: ---------------------------------------------------------------------------------- Name UID Status Failed Substatus ---------------------------------------------------------------------------------- beam_integration_benchmark beam_integration_benchmark0 SKIPPED ---------------------------------------------------------------------------------- Success rate: 0.00% (0/1) 2018-04-02 06:01:26,048 ac42d5ac MainThread INFO Complete logs can be found at: <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/runs/ac42d5ac/pkb.log> 2018-04-02 06:01:26,048 ac42d5ac MainThread INFO Completion statuses can be found at: <https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/runs/ac42d5ac/completion_statuses.json> Traceback (most recent call last): File "PerfKitBenchmarker/pkb.py", line 21, in <module> sys.exit(Main()) File "<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 952, in Main return RunBenchmarks() File "<https://builds.apache.org/job/beam_PerformanceTests_TFRecordIOIT/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 868, in RunBenchmarks if FLAGS.run_with_pdb and FLAGS.run_processes == 1: File "/home/jenkins/.local/lib/python2.7/site-packages/absl/flags/_flagvalues.py", line 477, in __getattr__ raise AttributeError(name) AttributeError: run_with_pdb Build step 'Execute shell' marked build as failure
