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https://issues.apache.org/jira/browse/CASSANDRA-4446?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13501722#comment-13501722
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Tamar Fraenkel commented on CASSANDRA-4446:
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I had the same experience, when I upgraded my cluster from 1.0.9 to 1.0.11. I 
ran drain before the upgrade, upgrade on the node finished and node restarted 
at 2012-11-20 10:20:58, but then I see in the logs reply of commit log:
{quote} 
 INFO [main] 2012-11-20 09:41:13,918 CommitLog.java (line 172) Replaying 
/raid0/cassandra/commitlog/CommitLog-1353402218337.log
 INFO [main] 2012-11-20 09:41:20,360 CommitLog.java (line 179) Log replay 
complete, 0 replayed mutations
 INFO [main] 2012-11-20 10:11:35,635 CommitLog.java (line 167) No commitlog 
files found; skipping replay
 INFO [main] 2012-11-20 10:21:11,631 CommitLog.java (line 172) Replaying 
/raid0/cassandra/commitlog/CommitLog-1353404473899.log
 INFO [main] 2012-11-20 10:21:18,119 CommitLog.java (line 179) Log replay 
complete, 6413 replayed mutations
 INFO [main] 2012-11-20 10:55:46,435 CommitLog.java (line 172) Replaying 
/raid0/cassandra/commitlog/CommitLog-1353406871619.log
 INFO [main] 2012-11-20 10:55:54,139 CommitLog.java (line 179) Log replay 
complete, 3 replayed mutations
{quote} 
This caused over increment of counters

                
> nodetool drain sometimes doesn't mark commitlog fully flushed
> -------------------------------------------------------------
>
>                 Key: CASSANDRA-4446
>                 URL: https://issues.apache.org/jira/browse/CASSANDRA-4446
>             Project: Cassandra
>          Issue Type: Bug
>    Affects Versions: 1.0.10
>         Environment: ubuntu 10.04 64bit
> Linux HOSTNAME 2.6.32-345-ec2 #48-Ubuntu SMP Wed May 2 19:29:55 UTC 2012 
> x86_64 GNU/Linux
> sun JVM
> cassandra 1.0.10 installed from apache deb
>            Reporter: Robert Coli
>         Attachments: 
> cassandra.1.0.10.replaying.log.after.exception.during.drain.txt
>
>
> I recently wiped a customer's QA cluster. I drained each node and verified 
> that they were drained. When I restarted the nodes, I saw the commitlog 
> replay create a memtable and then flush it. I have attached a sanitized log 
> snippet from a representative node at the time. 
> It appears to show the following :
> 1) Drain begins
> 2) Drain triggers flush
> 3) Flush triggers compaction
> 4) StorageService logs DRAINED message
> 5) compaction thread excepts
> 6) on restart, same CF creates a memtable
> 7) and then flushes it [1]
> The columnfamily involved in the replay in 7) is the CF for which the 
> compaction thread excepted in 5). This seems to suggest a timing issue 
> whereby the exception in 5) prevents the flush in 3) from marking all the 
> segments flushed, causing them to replay after restart.
> In case it might be relevant, I did an online change of compaction strategy 
> from Leveled to SizeTiered during the uptime period preceding this drain.
> [1] Isn't commitlog replay not supposed to automatically trigger a flush in 
> modern cassandra?

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