Repository: incubator-reef
Updated Branches:
  refs/heads/master 4cca54bb8 -> 84ff5021c


http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/protobuf/ProtocolBufferClassHierarchy.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/protobuf/ProtocolBufferClassHierarchy.java
 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/protobuf/ProtocolBufferClassHierarchy.java
index e1bd96c..4b0328f 100644
--- 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/protobuf/ProtocolBufferClassHierarchy.java
+++ 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/protobuf/ProtocolBufferClassHierarchy.java
@@ -74,7 +74,8 @@ public class ProtocolBufferClassHierarchy implements 
ClassHierarchy {
                                                        boolean 
isExternalConstructor, boolean isUnit,
                                                        
List<ClassHierarchyProto.ConstructorDef> injectableConstructors,
                                                        
List<ClassHierarchyProto.ConstructorDef> otherConstructors,
-                                                       List<String> 
implFullNames, Iterable<ClassHierarchyProto.Node> children) {
+                                                       List<String> 
implFullNames,
+                                                       
Iterable<ClassHierarchyProto.Node> children) {
     return ClassHierarchyProto.Node
         .newBuilder()
         .setName(name)
@@ -91,7 +92,9 @@ public class ProtocolBufferClassHierarchy implements 
ClassHierarchy {
   }
 
   private static ClassHierarchyProto.Node newNamedParameterNode(String name,
-                                                                String 
fullName, String simpleArgClassName, String fullArgClassName,
+                                                                String 
fullName,
+                                                                String 
simpleArgClassName,
+                                                                String 
fullArgClassName,
                                                                 boolean isSet,
                                                                 boolean isList,
                                                                 String 
documentation, // can be null
@@ -121,7 +124,8 @@ public class ProtocolBufferClassHierarchy implements 
ClassHierarchy {
   }
 
   private static ClassHierarchyProto.Node newPackageNode(String name,
-                                                         String fullName, 
Iterable<ClassHierarchyProto.Node> children) {
+                                                         String fullName,
+                                                         
Iterable<ClassHierarchyProto.Node> children) {
     return ClassHierarchyProto.Node.newBuilder()
         .setPackageNode(ClassHierarchyProto.PackageNode.newBuilder().build())
         .setName(name).setFullName(fullName).addAllChildren(children).build();

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/types/NamedParameterNodeImpl.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/types/NamedParameterNodeImpl.java
 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/types/NamedParameterNodeImpl.java
index 248f003..f25781e 100644
--- 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/types/NamedParameterNodeImpl.java
+++ 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/implementation/types/NamedParameterNodeImpl.java
@@ -32,7 +32,8 @@ public class NamedParameterNodeImpl<T> extends AbstractNode 
implements
   private final boolean isList;
 
   public NamedParameterNodeImpl(Node parent, String simpleName,
-                                String fullName, String fullArgName, String 
simpleArgName, boolean isSet, boolean isList,
+                                String fullName, String fullArgName, String 
simpleArgName,
+                                boolean isSet, boolean isList,
                                 String documentation, String shortName, 
String[] defaultInstanceAsStrings) {
     super(parent, simpleName, fullName);
     this.fullArgName = fullArgName;

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ReflectionUtilities.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ReflectionUtilities.java
 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ReflectionUtilities.java
index ecfb11c..4b701dc 100644
--- 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ReflectionUtilities.java
+++ 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ReflectionUtilities.java
@@ -290,7 +290,8 @@ public final class ReflectionUtilities {
   /**
    * @param clazz
    * @return T if clazz implements Name<T>, null otherwise
-   * @throws org.apache.reef.tang.exceptions.BindException If clazz's 
definition incorrectly uses Name or @NamedParameter
+   * @throws org.apache.reef.tang.exceptions.BindException
+   * If clazz's definition incorrectly uses Name or @NamedParameter
    */
   public static Type getNamedParameterTargetOrNull(Class<?> clazz)
       throws ClassHierarchyException {

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/Tint.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/Tint.java 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/Tint.java
index e95ef60..9760adb 100644
--- a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/Tint.java
+++ b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/Tint.java
@@ -99,11 +99,13 @@ public class Tint {
 //  for(Constructor<?> c : injectConstructors) {
 //    classes.add(c.getDeclaringClass());
 //  }
-    Set<String> injectConstructors = 
r.getStore().getConstructorsAnnotatedWith(ReflectionUtilities.getFullName(Inject.class));
+    Set<String> injectConstructors =
+        
r.getStore().getConstructorsAnnotatedWith(ReflectionUtilities.getFullName(Inject.class));
     for (String s : injectConstructors) {
       strings.add(s.replaceAll("\\.<.+$", ""));
     }
-    Set<String> parameterConstructors = 
r.getStore().get(MethodParameterScanner.class, 
ReflectionUtilities.getFullName(Parameter.class));
+    Set<String> parameterConstructors =
+        r.getStore().get(MethodParameterScanner.class, 
ReflectionUtilities.getFullName(Parameter.class));
     for (String s : parameterConstructors) {
       strings.add(s.replaceAll("\\.<.+$", ""));
     }
@@ -111,9 +113,11 @@ public class Tint {
 //    for(Constructor<?> c : parameterConstructors) {
 //      classes.add(c.getDeclaringClass());
 //    }
-    Set<String> defaultStrings = 
r.getStore().get(TypeAnnotationsScanner.class, 
ReflectionUtilities.getFullName(DefaultImplementation.class));
+    Set<String> defaultStrings =
+        r.getStore().get(TypeAnnotationsScanner.class, 
ReflectionUtilities.getFullName(DefaultImplementation.class));
     strings.addAll(defaultStrings);
-    strings.addAll(r.getStore().get(TypeAnnotationsScanner.class, 
ReflectionUtilities.getFullName(NamedParameter.class)));
+    strings.addAll(r.getStore().get(TypeAnnotationsScanner.class,
+        ReflectionUtilities.getFullName(NamedParameter.class)));
     strings.addAll(r.getStore().get(TypeAnnotationsScanner.class, 
ReflectionUtilities.getFullName(Unit.class)));
 //    classes.addAll(r.getTypesAnnotatedWith(DefaultImplementation.class));
 //    classes.addAll(r.getTypesAnnotatedWith(NamedParameter.class));
@@ -121,10 +125,12 @@ public class Tint {
 
     strings.addAll(r.getStore().get(SubTypesScanner.class, 
ReflectionUtilities.getFullName(Name.class)));
 
-    moduleBuilders.addAll(r.getStore().get(SubTypesScanner.class, 
ReflectionUtilities.getFullName(ConfigurationModuleBuilder.class)));
+    moduleBuilders.addAll(r.getStore().get(SubTypesScanner.class,
+        ReflectionUtilities.getFullName(ConfigurationModuleBuilder.class)));
 //    classes.addAll(r.getSubTypesOf(Name.class));
 
-    ch = Tang.Factory.getTang().getDefaultClassHierarchy(jars, (Class<? 
extends ExternalConstructor<?>>[]) new Class[0]);
+    ch = Tang.Factory.getTang().getDefaultClassHierarchy(jars,
+        (Class<? extends ExternalConstructor<?>>[]) new Class[0]);
 //    for(String s : defaultStrings) {
 //      if(classFilter(checkTang, s)) {
 //        try {
@@ -312,7 +318,8 @@ public class Tint {
         out.println("<html><head><title>TangDoc</title>");
 
         out.println("<style>");
-        out.println("body { font-family: 'Segoe UI', 'Comic Sans MS'; 
font-size:12pt; font-weight: 200; margin: 1em; column-count: 2; }");
+        out.println("body { font-family: 'Segoe UI', 'Comic Sans MS'; 
font-size:12pt; font-weight: 200; " +
+            "margin: 1em; column-count: 2; }");
         out.println(".package { font-size:18pt; font-weight: 500; column-span: 
all; }");
 //      out.println(".class { break-after: never; }");
 //      out.println(".doc { break-before: never; }");
@@ -328,10 +335,8 @@ public class Tint {
         out.println("</style>");
 
         out.println("</head><body>");
-//      out.println("<table 
border='1'><tr><th>Type</th><th>Name</th><th>Default 
value</th><th>Documentation</th><th>Used by</th><th>Set by</th></tr>");
 
         String currentPackage = "";
-//      int numcols = 0;
         for (final Node n : t.getNamesUsedAndSet()) {
           String fullName = n.getFullName();
           String[] tok = fullName.split("\\.");
@@ -348,13 +353,7 @@ public class Tint {
             currentPackage = pack;
             out.println(t.endPackage());
             out.println(t.startPackage(currentPackage));
-//          numcols = 0;
-//          out.println("<div class='row'>");
           }
-//        numcols++;
-//        if(numcols == NUMCOLS) {
-//          out.println("</div><div class='row'>");
-//        }
           if (n instanceof NamedParameterNode<?>) {
             out.println(t.toHtmlString((NamedParameterNode<?>) n, 
currentPackage));
           } else if (n instanceof ClassNode<?>) {
@@ -365,12 +364,12 @@ public class Tint {
         }
         out.println("</div>");
         out.println(t.endPackage());
-//      out.println("</table>");
         out.println("<div class='package'>Module definitions</div>");
         for (final Field f : t.modules.keySet()) {
           String moduleName = ReflectionUtilities.getFullName(f);
 //        String declaringClassName = 
ReflectionUtilities.getFullName(f.getDeclaringClass());
-          out.println("<div class='module-margin' id='" + moduleName + "'><div 
class='decl'><span class='fullName'>" + moduleName + "</span>");
+          out.println("<div class='module-margin' id='" + moduleName + "'><div 
class='decl'><span class='fullName'>" +
+              moduleName + "</span>");
           out.println("<pre>");
           String conf = t.modules.get(f).toPrettyString();
           String[] tok = conf.split("\n");
@@ -398,14 +397,18 @@ public class Tint {
               e.printStackTrace();
             }
             String typ = clz.isInterface() ? "interface" : "class";
-            out.println("<div class='module-margin' id='" + c.getFullName() + 
"'><div class='decl'><span class='fullName'>" + typ + " " + c.getFullName() + 
"</span>");
+            out.println("<div class='module-margin' id='" + c.getFullName() + 
"'><div class='decl'>" +
+                "<span class='fullName'>" + typ + " " + c.getFullName() + 
"</span>");
             for (ConstructorDef<?> d : c.getInjectableConstructors()) {
               out.println("<div class='uses'>" + c.getFullName() + "(");
               for (ConstructorArg a : d.getArgs()) {
                 if (a.getNamedParameterName() != null) {
-                  out.print("<div class='constructorArg'><a href='#" + 
a.getType() + "'>" + stripPrefix(a.getType(), "xxx") + "</a> <a href='#" + 
a.getNamedParameterName() + "'>" + a.getNamedParameterName() + "</a></div>");
+                  out.print("<div class='constructorArg'><a href='#" + 
a.getType() + "'>" +
+                      stripPrefix(a.getType(), "xxx") + "</a> <a href='#" + 
a.getNamedParameterName() + "'>" +
+                      a.getNamedParameterName() + "</a></div>");
                 } else {
-                  out.print("<div class='constructorArg'><a href='#" + 
a.getType() + "'>" + stripPrefix(a.getType(), "xxx") + "</a></div>");
+                  out.print("<div class='constructorArg'><a href='#" + 
a.getType() + "'>" +
+                      stripPrefix(a.getType(), "xxx") + "</a></div>");
                 }
               }
               out.println(")</div>");
@@ -427,7 +430,7 @@ public class Tint {
   }
 
   private boolean classFilter(boolean checkTang, String s) {
-    return (checkTang || /*s.startsWith("org.apache.reef.tang.examples.timer") 
||*/ !s.startsWith("org.apache.reef.tang"));
+    return (checkTang || !s.startsWith("org.apache.reef.tang"));
   }
 
   private void processDefaultAnnotation(Class<?> cmb) {

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ValidateConfiguration.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ValidateConfiguration.java
 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ValidateConfiguration.java
index 31f4b96..9ba6450 100644
--- 
a/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ValidateConfiguration.java
+++ 
b/lang/java/reef-tang/tang/src/main/java/org/apache/reef/tang/util/ValidateConfiguration.java
@@ -71,7 +71,8 @@ public class ValidateConfiguration {
 
   public static void main(String[] argv) throws IOException, BindException, 
InjectionException {
     @SuppressWarnings("unchecked")
-    JavaConfigurationBuilder cb = 
Tang.Factory.getTang().newConfigurationBuilder((Class<? extends 
ExternalConstructor<?>>[]) new Class[]{FileParser.class});
+    JavaConfigurationBuilder cb = 
Tang.Factory.getTang().newConfigurationBuilder(
+        (Class<? extends ExternalConstructor<?>>[]) new 
Class[]{FileParser.class});
     CommandLine cl = new CommandLine(cb);
     cl.processCommandLine(argv,
         Target.class,

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/examples/p2p/Pull2Push.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/examples/p2p/Pull2Push.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/examples/p2p/Pull2Push.java
index 1f1fd34..40e56a5 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/examples/p2p/Pull2Push.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/examples/p2p/Pull2Push.java
@@ -79,7 +79,8 @@ public final class Pull2Push<T> implements Runnable, 
AutoCloseable {
           this.output.onNext(message);
         } else {
           // The message source has returned null as the next message. We drop 
the message source in that case.
-          Logger.getLogger(Pull2Push.class.getName()).log(Level.INFO, "Droping 
message source {0} from the queue", nextSource.toString());
+          Logger.getLogger(Pull2Push.class.getName()).log(Level.INFO, "Droping 
message source {0} from the queue",
+              nextSource.toString());
         }
       }
     }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/DefaultIdentifierFactory.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/DefaultIdentifierFactory.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/DefaultIdentifierFactory.java
index 4b6a3f7..05cc7ef 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/DefaultIdentifierFactory.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/DefaultIdentifierFactory.java
@@ -82,7 +82,8 @@ public class DefaultIdentifierFactory implements 
IdentifierFactory {
       Object[] args = new Object[1];
       args[0] = str.substring(index + 3);
       return constructor.newInstance(args);
-    } catch (NoSuchMethodException | SecurityException | 
InstantiationException | IllegalAccessException | IllegalArgumentException | 
InvocationTargetException e) {
+    } catch (NoSuchMethodException | SecurityException | 
InstantiationException | IllegalAccessException |
+             IllegalArgumentException | InvocationTargetException e) {
       e.printStackTrace();
       throw new RemoteRuntimeException(e);
     }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/IndependentIterationsThreadPoolStage.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/IndependentIterationsThreadPoolStage.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/IndependentIterationsThreadPoolStage.java
index 46d6191..11048fc 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/IndependentIterationsThreadPoolStage.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/IndependentIterationsThreadPoolStage.java
@@ -33,7 +33,8 @@ import java.util.logging.Logger;
  * can be fired in any order.
  *
  * @param numThreads  fixed number of threads available in the pool
- * @param granularity maximum number of events executed serially. The right 
choice will balance task spawn overhead with parallelism.
+ * @param granularity maximum number of events executed serially.
+ *                    The right choice will balance task spawn overhead with 
parallelism.
  */
 public class IndependentIterationsThreadPoolStage<T> extends 
AbstractEStage<List<T>> {
 

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/WakeSharedPool.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/WakeSharedPool.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/WakeSharedPool.java
index d46a71f..546747e 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/WakeSharedPool.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/impl/WakeSharedPool.java
@@ -56,12 +56,13 @@ public class WakeSharedPool implements Stage {
 
   @Inject
   public WakeSharedPool(@Parameter(Parallelism.class) int parallelism) {
-    this.pool = new ForkJoinPool(parallelism, 
ForkJoinPool.defaultForkJoinWorkerThreadFactory, new 
Thread.UncaughtExceptionHandler() {
-      @Override
-      public void uncaughtException(Thread t, Throwable e) {
-        // TODO: need to pass this upwards to REEF can grab it
-      }
-    },
+    this.pool = new ForkJoinPool(parallelism, 
ForkJoinPool.defaultForkJoinWorkerThreadFactory,
+        new Thread.UncaughtExceptionHandler() {
+          @Override
+          public void uncaughtException(Thread t, Throwable e) {
+            // TODO: need to pass this upwards to REEF can grab it
+          }
+        },
         // async mode turned on so a task that invokes other tasks does not 
have to join on them.
         // this is appropriate for event-based tasks, where once you submit an 
event to a stage it
         // is always fire-and-forget.
@@ -83,7 +84,9 @@ public class WakeSharedPool implements Stage {
 
   public void submit(ForkJoinTask<?> t) {
     if (ForkJoinTask.inForkJoinPool()) {
-      ForkJoinTask.invokeAll(t);            // alternatively just 
pool().pool.execute(t), which simply forces it to be this pool (right now we 
expect only one anyway)
+      ForkJoinTask.invokeAll(t);
+      // alternatively just pool().pool.execute(t), which simply forces it to 
be this pool
+      // (right now we expect only one anyway)
     } else {
       pool.submit(t);
     }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/profiler/WakeProfiler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/profiler/WakeProfiler.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/profiler/WakeProfiler.java
index a46a03b..927815a 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/profiler/WakeProfiler.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/profiler/WakeProfiler.java
@@ -97,7 +97,8 @@ public class WakeProfiler implements Aspect {
 
   @SuppressWarnings("unchecked")
   @Override
-  public <T> T inject(ConstructorDef<T> constructorDef, Constructor<T> 
constructor, Object[] args) throws InvocationTargetException, 
IllegalAccessException, IllegalArgumentException, InstantiationException {
+  public <T> T inject(ConstructorDef<T> constructorDef, Constructor<T> 
constructor, Object[] args)
+      throws InvocationTargetException, IllegalAccessException, 
IllegalArgumentException, InstantiationException {
 //    LOG.info("inject" + constructor + "->" + args.length);
     Vertex<?>[] vArgs = new Vertex[args.length];
     for (int i = 0; i < args.length; i++) {
@@ -243,7 +244,8 @@ public class WakeProfiler implements Aspect {
         if (stat != null) {
           long cnt = stat.messageCount.get();
           long lat = stat.sumLatency.get();
-          tooltip = ",\"count\":" + cnt + ",\"latency\":\"" + (((double) lat) 
/ (((double) cnt) * 1000000.0) + "\""); // quote the latency, since it might be 
nan
+          tooltip = ",\"count\":" + cnt + ",\"latency\":\"" + (((double) lat) 
/ (((double) cnt) * 1000000.0) + "\"");
+          // quote the latency, since it might be nan
         } else {
           tooltip = null;
         }
@@ -272,14 +274,16 @@ public class WakeProfiler implements Aspect {
           Integer off = offVertex.get(futureTarget);
           LOG.fine("future target " + futureTarget + " off = " + off);
           if (off != null) {
-            links.add("{\"target\":" + offVertex.get(v) + ",\"source\":" + off 
+ ",\"value\":" + 1.0 + ",\"back\":true}");
+            links.add("{\"target\":" + offVertex.get(v) + ",\"source\":" + off 
+ ",\"value\":" + 1.0 +
+                ",\"back\":true}");
           }
         } else {
           Integer off = offVertex.get(w);
           if (off != null) {
             Stats s = stats.get(w.getObject());
             if (s != null) {
-              links.add("{\"source\":" + offVertex.get(v) + ",\"target\":" + 
off + ",\"value\":" + (s.messageCount.get() + 3.0) + "}");
+              links.add("{\"source\":" + offVertex.get(v) + ",\"target\":" + 
off + ",\"value\":" +
+                  (s.messageCount.get() + 3.0) + "}");
             } else {
               links.add("{\"source\":" + offVertex.get(v) + ",\"target\":" + 
off + ",\"value\":" + 1.0 + "}");
             }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteConfiguration.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteConfiguration.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteConfiguration.java
index 0ec3427..81223f8 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteConfiguration.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteConfiguration.java
@@ -36,7 +36,8 @@ public final class RemoteConfiguration {
     // Intentionally empty
   }
 
-  @NamedParameter(short_name = "rm_host", doc = "The host address to be used 
for messages.", default_value = "##UNKNOWN##")
+  @NamedParameter(short_name = "rm_host", doc = "The host address to be used 
for messages.",
+      default_value = "##UNKNOWN##")
   public static final class HostAddress implements Name<String> {
     // Intentionally empty
   }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManager.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManager.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManager.java
index e954ec3..74a6660 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManager.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManager.java
@@ -56,7 +56,9 @@ public interface RemoteManager extends Stage {
    * @param theHandler       the event handler
    * @return the subscription that can be used to unsubscribe later
    */
-  <T, U extends T> AutoCloseable registerHandler(final RemoteIdentifier 
sourceIdentifier, final Class<U> messageType, final EventHandler<T> theHandler);
+  <T, U extends T> AutoCloseable registerHandler(final RemoteIdentifier 
sourceIdentifier,
+                                                 final Class<U> messageType,
+                                                 final EventHandler<T> 
theHandler);
 
   /**
    * Registers the given EventHandler to be called for the given message type
@@ -69,7 +71,8 @@ public interface RemoteManager extends Stage {
    * @param theHandler  the event handler
    * @return the subscription that can be used to unsubscribe later
    */
-  <T, U extends T> AutoCloseable registerHandler(final Class<U> messageType, 
final EventHandler<RemoteMessage<T>> theHandler);
+  <T, U extends T> AutoCloseable registerHandler(final Class<U> messageType,
+                                                 final 
EventHandler<RemoteMessage<T>> theHandler);
 
   /**
    * Register an EventHandler that gets called by Wake in the presence of

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManagerFactory.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManagerFactory.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManagerFactory.java
index 4c741de..354a160 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManagerFactory.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/RemoteManagerFactory.java
@@ -72,7 +72,8 @@ public interface RemoteManagerFactory {
    * @param errorHandler      the error handler invoked for exceptions by the 
returned RemoteManager.
    * @param orderingGuarantee whether or not the returned RemoteManager should 
guarantee message orders.
    * @param numberOfTries     the number of retries before the returned 
RemoteManager declares sending a failure.
-   * @param retryTimeout      the time (in ms) after which the returned 
RemoteManager considers a sending attempt failed.
+   * @param retryTimeout      the time (in ms) after which the returned 
RemoteManager considers a sending attempt
+   *                          failed.
    * @param <T>               the message type sent / received by the returned 
RemoteManager.
    * @return a new instance of RemoteManager with all parameters but the given 
one injected via Tang.
    */
@@ -95,9 +96,12 @@ public interface RemoteManagerFactory {
    * @param errorHandler         the error handler invoked for exceptions by 
the returned RemoteManager.
    * @param orderingGuarantee    whether or not the returned RemoteManager 
should guarantee message orders.
    * @param numberOfTries        the number of retries before the returned 
RemoteManager declares sending a failure.
-   * @param retryTimeout         the time (in ms) after which the returned 
RemoteManager considers a sending attempt failed.
-   * @param localAddressProvider the LocalAddressProvider used by the returned 
RemoteManager to determine the address to bind to.
-   * @param tcpPortProvider      the TcpPortProvider used by the returned 
RemoteManager to determine the port to listen to.
+   * @param retryTimeout         the time (in ms) after which the returned 
RemoteManager considers a sending attempt
+   *                             failed.
+   * @param localAddressProvider the LocalAddressProvider used by the returned 
RemoteManager to determine the address
+   *                             to bind to.
+   * @param tcpPortProvider      the TcpPortProvider used by the returned 
RemoteManager to determine the port
+   *                             to listen to.
    * @param <T>                  the message type sent / received by the 
returned RemoteManager.
    * @return a new instance of RemoteManager with all parameters but the given 
one injected via Tang.
    */

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/address/LegacyLocalAddressProvider.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/address/LegacyLocalAddressProvider.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/address/LegacyLocalAddressProvider.java
index 5fd05d4..902722d 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/address/LegacyLocalAddressProvider.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/address/LegacyLocalAddressProvider.java
@@ -75,7 +75,8 @@ public final class LegacyLocalAddressProvider implements 
LocalAddressProvider {
           }
         }
         if (sortedAddrs.isEmpty()) {
-          throw new WakeRuntimeException("This machine apparently doesn't have 
any IP addresses (not even 127.0.0.1) on interfaces that are up.");
+          throw new WakeRuntimeException("This machine apparently doesn't have 
any IP addresses (not even 127.0.0.1) " +
+              "on interfaces that are up.");
         }
         cached.set(sortedAddrs.pollFirst().getHostAddress());
         LOG.log(Level.FINE, "Local address is {0}", cached.get());

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/DefaultRemoteManagerImplementation.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/DefaultRemoteManagerImplementation.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/DefaultRemoteManagerImplementation.java
index 83247b6..5dd2851 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/DefaultRemoteManagerImplementation.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/DefaultRemoteManagerImplementation.java
@@ -135,7 +135,8 @@ public class DefaultRemoteManagerImplementation implements 
RemoteManager {
                 new RemoteReceiverStage(this.handlerContainer, errorHandler, 
10);
 
     this.transport = tpFactory.newInstance(
-                hostAddress, listeningPort, this.reRecvStage, 
this.reRecvStage, numberOfTries, retryTimeout, tcpPortProvider);
+                hostAddress, listeningPort, this.reRecvStage, 
this.reRecvStage, numberOfTries, retryTimeout,
+                tcpPortProvider);
 
     this.handlerContainer.setTransport(this.transport);
 
@@ -145,7 +146,8 @@ public class DefaultRemoteManagerImplementation implements 
RemoteManager {
     this.reSendStage = new RemoteSenderStage(codec, this.transport, 10);
 
     StageManager.instance().register(this);
-    LOG.log(Level.FINEST, "RemoteManager {0} instantiated id {1} counter {2} 
listening on {3}:{4}. Binding address provided by {5}",
+    LOG.log(Level.FINEST, "RemoteManager {0} instantiated id {1} counter {2} 
listening on {3}:{4}. " +
+                "Binding address provided by {5}",
                 new Object[]{this.name, this.myIdentifier, 
COUNTER.incrementAndGet(),
                         this.transport.getLocalAddress().toString(),
                         this.transport.getListeningPort(), 
localAddressProvider}

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/HandlerContainer.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/HandlerContainer.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/HandlerContainer.java
index b53ace0..d05bb55 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/HandlerContainer.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/HandlerContainer.java
@@ -57,7 +57,8 @@ final class HandlerContainer<T> implements 
EventHandler<RemoteEvent<byte[]>> {
   }
 
   public AutoCloseable registerHandler(final RemoteIdentifier sourceIdentifier,
-                                       final Class<? extends T> messageType, 
final EventHandler<? extends T> theHandler) {
+                                       final Class<? extends T> messageType,
+                                       final EventHandler<? extends T> 
theHandler) {
 
     final Tuple2<RemoteIdentifier, Class<? extends T>> tuple =
         new Tuple2<RemoteIdentifier, Class<? extends T>>(sourceIdentifier, 
messageType);

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/MultiCodec.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/MultiCodec.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/MultiCodec.java
index e9ae2d7..1fad3cd 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/MultiCodec.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/MultiCodec.java
@@ -42,8 +42,10 @@ public class MultiCodec<T> implements Codec<T> {
    * @param clazzToDecoderMap
    */
   public MultiCodec(Map<Class<? extends T>, Codec<? extends T>> 
clazzToCodecMap) {
-    Map<Class<? extends T>, Encoder<? extends T>> clazzToEncoderMap = new 
HashMap<Class<? extends T>, Encoder<? extends T>>();
-    Map<Class<? extends T>, Decoder<? extends T>> clazzToDecoderMap = new 
HashMap<Class<? extends T>, Decoder<? extends T>>();
+    Map<Class<? extends T>, Encoder<? extends T>> clazzToEncoderMap =
+        new HashMap<Class<? extends T>, Encoder<? extends T>>();
+    Map<Class<? extends T>, Decoder<? extends T>> clazzToDecoderMap =
+        new HashMap<Class<? extends T>, Decoder<? extends T>>();
     for (Class<? extends T> clazz : clazzToCodecMap.keySet()) {
       clazzToEncoderMap.put(clazz, clazzToCodecMap.get(clazz));
       clazzToDecoderMap.put(clazz, clazzToCodecMap.get(clazz));

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/OrderedRemoteReceiverStage.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/OrderedRemoteReceiverStage.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/OrderedRemoteReceiverStage.java
index 2e76dac..d5302f7 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/OrderedRemoteReceiverStage.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/OrderedRemoteReceiverStage.java
@@ -55,11 +55,15 @@ public class OrderedRemoteReceiverStage implements 
EStage<TransportEvent> {
   public OrderedRemoteReceiverStage(EventHandler<RemoteEvent<byte[]>> handler, 
EventHandler<Throwable> errorHandler) {
     this.streamMap = new ConcurrentHashMap<SocketAddress, 
OrderedEventStream>();
 
-    this.pushExecutor = Executors.newCachedThreadPool(new 
DefaultThreadFactory(OrderedRemoteReceiverStage.class.getName() + "_Push"));
-    this.pullExecutor = Executors.newCachedThreadPool(new 
DefaultThreadFactory(OrderedRemoteReceiverStage.class.getName() + "_Pull"));
-
-    this.pullStage = new ThreadPoolStage<OrderedEventStream>(new 
OrderedPullEventHandler(handler), this.pullExecutor, errorHandler);
-    this.pushStage = new ThreadPoolStage<TransportEvent>(new 
OrderedPushEventHandler(streamMap, pullStage), this.pushExecutor, 
errorHandler); // for decoupling
+    this.pushExecutor = Executors.newCachedThreadPool(
+        new DefaultThreadFactory(OrderedRemoteReceiverStage.class.getName() + 
"_Push"));
+    this.pullExecutor = Executors.newCachedThreadPool(
+        new DefaultThreadFactory(OrderedRemoteReceiverStage.class.getName() + 
"_Pull"));
+
+    this.pullStage = new ThreadPoolStage<OrderedEventStream>(
+        new OrderedPullEventHandler(handler), this.pullExecutor, errorHandler);
+    this.pushStage = new ThreadPoolStage<TransportEvent>(
+        new OrderedPushEventHandler(streamMap, pullStage), this.pushExecutor, 
errorHandler); // for decoupling
   }
 
   @Override
@@ -192,7 +196,8 @@ class OrderedEventStream {
         ++nextSeq;
         return event;
       } else {
-        LOG.log(Level.FINER, "Event sequence is {0} does not match expected 
{1}", new Object[]{event.getSeq(), nextSeq});
+        LOG.log(Level.FINER, "Event sequence is {0} does not match expected 
{1}",
+            new Object[]{event.getSeq(), nextSeq});
       }
     } else {
       LOG.log(Level.FINER, "Event is null");

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/ProxyEventHandler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/ProxyEventHandler.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/ProxyEventHandler.java
index 6a9fa06..8f763ae 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/ProxyEventHandler.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/ProxyEventHandler.java
@@ -48,8 +48,10 @@ public class ProxyEventHandler<T> implements EventHandler<T> 
{
    * @param reStage        the sender stage
    * @throws RemoteRuntimeException
    */
-  public ProxyEventHandler(RemoteIdentifier myId, RemoteIdentifier remoteId, 
String remoteSinkName, EventHandler<RemoteEvent<T>> handler, 
RemoteSeqNumGenerator seqGen) {
-    LOG.log(Level.FINE, "ProxyEventHandler myId: {0} remoteId: {1} remoteSink: 
{2} handler: {3}", new Object[]{myId, remoteId, remoteSinkName, handler});
+  public ProxyEventHandler(RemoteIdentifier myId, RemoteIdentifier remoteId, 
String remoteSinkName,
+                           EventHandler<RemoteEvent<T>> handler, 
RemoteSeqNumGenerator seqGen) {
+    LOG.log(Level.FINE, "ProxyEventHandler myId: {0} remoteId: {1} remoteSink: 
{2} handler: {3}",
+        new Object[]{myId, remoteId, remoteSinkName, handler});
     if (!(myId instanceof SocketRemoteIdentifier && remoteId instanceof 
SocketRemoteIdentifier)) {
       throw new RemoteRuntimeException("Unsupported remote identifier type");
     }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteEventDecoder.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteEventDecoder.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteEventDecoder.java
index efec46f..7abf64e 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteEventDecoder.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteEventDecoder.java
@@ -53,7 +53,8 @@ public class RemoteEventDecoder<T> implements 
Decoder<RemoteEvent<T>> {
     WakeMessagePBuf pbuf;
     try {
       pbuf = WakeMessagePBuf.parseFrom(data);
-      return new RemoteEvent<T>(null, null, pbuf.getSource(), pbuf.getSink(), 
pbuf.getSeq(), decoder.decode(pbuf.getData().toByteArray()));
+      return new RemoteEvent<T>(null, null, pbuf.getSource(), pbuf.getSink(), 
pbuf.getSeq(),
+          decoder.decode(pbuf.getData().toByteArray()));
     } catch (InvalidProtocolBufferException e) {
       throw new RemoteRuntimeException(e);
     }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteSenderEventHandler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteSenderEventHandler.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteSenderEventHandler.java
index 308afc9..65b9461 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteSenderEventHandler.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/impl/RemoteSenderEventHandler.java
@@ -108,7 +108,8 @@ class RemoteSenderEventHandler<T> implements 
EventHandler<RemoteEvent<T>> {
         // consumeQueue();
 
         if (LOG.isLoggable(Level.FINEST)) {
-          LOG.log(Level.FINEST, "Send an event from " + 
linkRef.get().getLocalAddress() + " to " + linkRef.get().getRemoteAddress() + " 
value " + value);
+          LOG.log(Level.FINEST, "Send an event from " + 
linkRef.get().getLocalAddress() + " to " +
+              linkRef.get().getRemoteAddress() + " value " + value);
         }
         linkRef.get().write(encoder.encode(value));
       }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/Transport.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/Transport.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/Transport.java
index 9979588..51ef7b3 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/Transport.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/Transport.java
@@ -44,7 +44,8 @@ public interface Transport extends Stage {
    * @return a link associated with the address
    * @throws IOException
    */
-  <T> Link<T> open(SocketAddress remoteAddr, Encoder<? super T> encoder, 
LinkListener<? super T> listener) throws IOException;
+  <T> Link<T> open(SocketAddress remoteAddr, Encoder<? super T> encoder, 
LinkListener<? super T> listener)
+      throws IOException;
 
   /**
    * Returns a link for the remote address if already cached; otherwise, 
returns null.

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/ChunkedReadWriteHandler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/ChunkedReadWriteHandler.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/ChunkedReadWriteHandler.java
index bc0d35c..df15f87 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/ChunkedReadWriteHandler.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/ChunkedReadWriteHandler.java
@@ -60,7 +60,8 @@ public class ChunkedReadWriteHandler extends 
ChunkedWriteHandler {
   private byte[] retArr;
 
   /**
-   * @see 
org.jboss.netty.handler.stream.ChunkedWriteHandler#handleUpstream(org.jboss.netty.channel.ChannelHandlerContext,
 org.jboss.netty.channel.ChannelEvent)
+   * @see org.jboss.netty.handler.stream.ChunkedWriteHandler#handleUpstream(
+   *      org.jboss.netty.channel.ChannelHandlerContext, 
org.jboss.netty.channel.ChannelEvent)
    */
   @Override
   public void channelRead(ChannelHandlerContext ctx, Object msg) throws 
Exception {
@@ -72,21 +73,26 @@ public class ChunkedReadWriteHandler extends 
ChunkedWriteHandler {
       if (start) {
         //LOG.log(Level.FINEST, "{0} Starting dechunking of a chunked write", 
curThrName);
         expectedSize = getSize(data);
-        // LOG.log(Level.FINEST, "Expected Size = {0}. Wrapping byte[{1}] into 
a ChannelBuffer", new Object[]{expectedSize,expectedSize});
+        // LOG.log(Level.FINEST, "Expected Size = {0}. Wrapping byte[{1}] into 
a ChannelBuffer",
+        // new Object[]{expectedSize,expectedSize});
         retArr = new byte[expectedSize];
         readBuffer = Unpooled.wrappedBuffer(retArr);
         readBuffer.clear();
-        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, curThrName + 
"read buffer: cur sz = " + readBuffer.writerIndex() + " + " + (data.length - 
INT_SIZE) + " bytes will added by current chunk");
+        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, curThrName + 
"read buffer: cur sz = " +
+        // readBuffer.writerIndex() + " + " + (data.length - INT_SIZE) + " 
bytes will added by current chunk");
         readBuffer.writeBytes(data, INT_SIZE, data.length - INT_SIZE);
-        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, curThrName + 
"read buffer: new sz = " + readBuffer.writerIndex());
+        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, curThrName + 
"read buffer: new sz = " +
+        // readBuffer.writerIndex());
         start = false;
       } else {
         readBuffer.writeBytes(data);
       }
 
       if (readBuffer.writerIndex() == expectedSize) {
-        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, "{0} 
Dechunking complete. Creating upstream msg event with the dechunked byte[{1}]", 
new Object[]{curThrName, expectedSize});
-        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, "Resetting 
state to begin another dechunking", curThrName);
+        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, "{0} 
Dechunking complete." +
+        // "Creating upstream msg event with the dechunked byte[{1}]", new 
Object[]{curThrName, expectedSize});
+        //if (LOG.isLoggable(Level.FINEST)) LOG.log(Level.FINEST, "Resetting 
state to begin another dechunking",
+        // curThrName);
         byte[] temp = retArr;
         start = true;
         expectedSize = 0;

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java
index 92f59c1..cfb386e 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java
@@ -157,9 +157,12 @@ public class NettyMessagingTransport implements Transport {
     this.clientEventListener = new 
NettyClientEventListener(this.addrToLinkRefMap, clientStage);
     this.serverEventListener = new 
NettyServerEventListener(this.addrToLinkRefMap, serverStage);
 
-    this.serverBossGroup = new NioEventLoopGroup(SERVER_BOSS_NUM_THREADS, new 
DefaultThreadFactory(CLASS_NAME + "ServerBoss"));
-    this.serverWorkerGroup = new NioEventLoopGroup(SERVER_WORKER_NUM_THREADS, 
new DefaultThreadFactory(CLASS_NAME + "ServerWorker"));
-    this.clientWorkerGroup = new NioEventLoopGroup(CLIENT_WORKER_NUM_THREADS, 
new DefaultThreadFactory(CLASS_NAME + "ClientWorker"));
+    this.serverBossGroup = new NioEventLoopGroup(SERVER_BOSS_NUM_THREADS,
+        new DefaultThreadFactory(CLASS_NAME + "ServerBoss"));
+    this.serverWorkerGroup = new NioEventLoopGroup(SERVER_WORKER_NUM_THREADS,
+        new DefaultThreadFactory(CLASS_NAME + "ServerWorker"));
+    this.clientWorkerGroup = new NioEventLoopGroup(CLIENT_WORKER_NUM_THREADS,
+        new DefaultThreadFactory(CLASS_NAME + "ClientWorker"));
 
     this.clientBootstrap = new Bootstrap();
     this.clientBootstrap.group(this.clientWorkerGroup)

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/time/runtime/RuntimeClock.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/time/runtime/RuntimeClock.java
 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/time/runtime/RuntimeClock.java
index 16166e6..e08f220 100644
--- 
a/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/time/runtime/RuntimeClock.java
+++ 
b/lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/time/runtime/RuntimeClock.java
@@ -57,8 +57,10 @@ public final class RuntimeClock implements Clock {
   RuntimeClock(final Timer timer,
                @Parameter(Clock.StartHandler.class) final 
InjectionFuture<Set<EventHandler<StartTime>>> startHandler,
                @Parameter(StopHandler.class) final 
InjectionFuture<Set<EventHandler<StopTime>>> stopHandler,
-               @Parameter(Clock.RuntimeStartHandler.class) final 
InjectionFuture<Set<EventHandler<RuntimeStart>>> runtimeStartHandler,
-               @Parameter(Clock.RuntimeStopHandler.class) final 
InjectionFuture<Set<EventHandler<RuntimeStop>>> runtimeStopHandler,
+               @Parameter(Clock.RuntimeStartHandler.class)
+               final InjectionFuture<Set<EventHandler<RuntimeStart>>> 
runtimeStartHandler,
+               @Parameter(Clock.RuntimeStopHandler.class)
+               final InjectionFuture<Set<EventHandler<RuntimeStop>>> 
runtimeStopHandler,
                @Parameter(IdleHandler.class) final 
InjectionFuture<Set<EventHandler<IdleClock>>> idleHandler) {
     this.timer = timer;
     this.schedule = new TreeSet<>();

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/EvaluatorListSerializer.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/EvaluatorListSerializer.java
 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/EvaluatorListSerializer.java
index 3acfd92..b92b39e 100644
--- 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/EvaluatorListSerializer.java
+++ 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/EvaluatorListSerializer.java
@@ -36,7 +36,9 @@ public interface EvaluatorListSerializer {
    * @param startTime
    * @return
    */
-  AvroEvaluatorList toAvro(final Map<String, EvaluatorDescriptor> 
evaluatorMap, final int totalEvaluators, final String startTime);
+  AvroEvaluatorList toAvro(final Map<String, EvaluatorDescriptor> evaluatorMap,
+                           final int totalEvaluators,
+                           final String startTime);
 
   /**
    * Convert AvroEvaluatorList to JSon string.

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpHandler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpHandler.java
 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpHandler.java
index 128e187..4d7406f 100644
--- 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpHandler.java
+++ 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpHandler.java
@@ -46,5 +46,6 @@ public interface HttpHandler {
    * @param parsedHttpRequest
    * @param response
    */
-  void onHttpRequest(final ParsedHttpRequest parsedHttpRequest, final 
HttpServletResponse response) throws IOException, ServletException;
+  void onHttpRequest(final ParsedHttpRequest parsedHttpRequest, final 
HttpServletResponse response)
+      throws IOException, ServletException;
 }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerImpl.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerImpl.java
 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerImpl.java
index d17c9dc..6cef8e0 100644
--- 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerImpl.java
+++ 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerImpl.java
@@ -113,7 +113,8 @@ public final class HttpServerImpl implements HttpServer {
   }
 
   /**
-   * It will be called from RuntimeStartHandler. As the Jetty server has been 
started at initialization phase, no need to start here.
+   * It will be called from RuntimeStartHandler.
+   * As the Jetty server has been started at initialization phase, no need to 
start here.
    *
    * @throws Exception
    */

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerReefEventHandler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerReefEventHandler.java
 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerReefEventHandler.java
index f53744b..8d092c1 100644
--- 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerReefEventHandler.java
+++ 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/HttpServerReefEventHandler.java
@@ -150,12 +150,16 @@ public final class HttpServerReefEventHandler implements 
HttpHandler {
       response.getWriter().println("Killing");
       break;
     case "duration":
-      final ArrayList<String> lines = 
LogParser.getFilteredLinesFromFile(driverStderrFile, LoggingScopeImpl.DURATION, 
LoggingScopeImpl.TOKEN, null);
+      final ArrayList<String> lines =
+          LogParser.getFilteredLinesFromFile(driverStderrFile, 
LoggingScopeImpl.DURATION, LoggingScopeImpl.TOKEN, null);
       writeLines(response, lines, "Performance...");
       break;
     case "stages":
-      final ArrayList<String> starts = 
LogParser.getFilteredLinesFromFile(driverStderrFile, 
LoggingScopeImpl.START_PREFIX, logLevelPrefix, null);
-      final ArrayList<String> exits = 
LogParser.getFilteredLinesFromFile(driverStderrFile, 
LoggingScopeImpl.EXIT_PREFIX, logLevelPrefix, LoggingScopeImpl.DURATION);
+      final ArrayList<String> starts =
+          LogParser.getFilteredLinesFromFile(driverStderrFile, 
LoggingScopeImpl.START_PREFIX, logLevelPrefix, null);
+      final ArrayList<String> exits =
+          LogParser.getFilteredLinesFromFile(driverStderrFile, 
LoggingScopeImpl.EXIT_PREFIX, logLevelPrefix,
+              LoggingScopeImpl.DURATION);
       final ArrayList<String> startsStages = LogParser.findStages(starts, 
LogParser.startIndicators);
       final ArrayList<String> endStages = LogParser.findStages(exits, 
LogParser.endIndicators);
       final ArrayList<String> result = LogParser.mergeStages(startsStages, 
endStages);
@@ -324,7 +328,8 @@ public final class HttpServerReefEventHandler implements 
HttpHandler {
       final DriverInfoSerializer serializer =
           
Tang.Factory.getTang().newInjector().getInstance(DriverInfoSerializer.class);
       final AvroDriverInfo driverInfo = serializer.toAvro(
-          this.reefStateManager.getDriverEndpointIdentifier(), 
this.reefStateManager.getStartTime(), this.reefStateManager.getServicesInfo());
+          this.reefStateManager.getDriverEndpointIdentifier(), 
this.reefStateManager.getStartTime(),
+          this.reefStateManager.getServicesInfo());
       writeResponse(response, serializer.toString(driverInfo));
     } catch (final InjectionException e) {
       LOG.log(Level.SEVERE, "Error in injecting DriverInfoSerializer.", e);
@@ -358,7 +363,8 @@ public final class HttpServerReefEventHandler implements 
HttpHandler {
     writer.println(String.format("Services registered on Driver:"));
     writer.write("<br/><br/>");
     for (final AvroReefServiceInfo service : 
this.reefStateManager.getServicesInfo()) {
-      writer.println(String.format("Service: [%s] , Information: [%s]", 
service.getServiceName(), service.getServiceInfo()));
+      writer.println(String.format("Service: [%s] , Information: [%s]", 
service.getServiceName(),
+          service.getServiceInfo()));
       writer.write("<br/><br/>");
     }
 
@@ -372,7 +378,8 @@ public final class HttpServerReefEventHandler implements 
HttpHandler {
    * @param header
    * @throws IOException
    */
-  private void writeLines(final HttpServletResponse response, final 
ArrayList<String> lines, final String header) throws IOException {
+  private void writeLines(final HttpServletResponse response, final 
ArrayList<String> lines, final String header)
+      throws IOException {
     LOG.log(Level.INFO, "HttpServerReefEventHandler writeLines is called");
 
     final PrintWriter writer = response.getWriter();

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/JettyHandler.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/JettyHandler.java
 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/JettyHandler.java
index 6886e03..205ce48 100644
--- 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/JettyHandler.java
+++ 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/JettyHandler.java
@@ -87,7 +87,8 @@ class JettyHandler extends AbstractHandler {
     final ParsedHttpRequest parsedHttpRequest = new ParsedHttpRequest(request);
     final HttpHandler handler = validate(request, response, parsedHttpRequest);
     if (handler != null) {
-      LOG.log(Level.INFO, "calling HttpHandler.onHttpRequest from 
JettyHandler.handle() for {0}.", handler.getUriSpecification());
+      LOG.log(Level.INFO, "calling HttpHandler.onHttpRequest from 
JettyHandler.handle() for {0}.",
+          handler.getUriSpecification());
       handler.onHttpRequest(parsedHttpRequest, response);
       response.setStatus(HttpServletResponse.SC_OK);
     }
@@ -118,7 +119,8 @@ class JettyHandler extends AbstractHandler {
 
     final HttpHandler handler = eventHandlers.get(specification.toLowerCase());
     if (handler == null) {
-      writeMessage(response, String.format("No event handler registered for: 
[%s].", specification), HttpServletResponse.SC_NOT_FOUND);
+      writeMessage(response, String.format("No event handler registered for: 
[%s].", specification),
+          HttpServletResponse.SC_NOT_FOUND);
       return null;
     }
 
@@ -137,7 +139,8 @@ class JettyHandler extends AbstractHandler {
    * @param status
    * @throws IOException
    */
-  private void writeMessage(final HttpServletResponse response, final String 
message, final int status) throws IOException {
+  private void writeMessage(final HttpServletResponse response, final String 
message, final int status)
+      throws IOException {
     response.getWriter().println(message);
     response.setStatus(status);
   }

http://git-wip-us.apache.org/repos/asf/incubator-reef/blob/84ff5021/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/ReefEventStateManager.java
----------------------------------------------------------------------
diff --git 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/ReefEventStateManager.java
 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/ReefEventStateManager.java
index fc8b859..6e2848a 100644
--- 
a/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/ReefEventStateManager.java
+++ 
b/lang/java/reef-webserver/src/main/java/org/apache/reef/webserver/ReefEventStateManager.java
@@ -151,7 +151,8 @@ public final class ReefEventStateManager {
   public void registerServiceInfo(AvroReefServiceInfo serviceInfo) {
     synchronized (this.serviceInfoList) {
       serviceInfoList.add(serviceInfo);
-      LOG.log(Level.INFO, "Registered Service [{0}] with Info [{1}]", new 
Object[]{serviceInfo.getServiceName(), serviceInfo.getServiceInfo()});
+      LOG.log(Level.INFO, "Registered Service [{0}] with Info [{1}]",
+          new Object[]{serviceInfo.getServiceName(), 
serviceInfo.getServiceInfo()});
     }
   }
 

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