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baunsgaard pushed a change to branch main
in repository https://gitbox.apache.org/repos/asf/systemds.git.
from b9f4686 [SYSTEMDS-3245] CSR sparse support for tansformapply
new f30dc39 [SYSTEMDS-3247] BinaryCell colVector and rowVector extensions
new 148092c [MINOR] Revert processAddRow to not use compressed
new 64af381 [SYSTEMDS-3226,SYSTEMDS-3246] PFOR column group and PreAgg
Cache blocking
The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
.../runtime/compress/CompressedMatrixBlock.java | 67 +--
.../compress/CompressedMatrixBlockFactory.java | 4 -
.../sysds/runtime/compress/colgroup/AColGroup.java | 75 +--
.../compress/colgroup/AColGroupCompressed.java | 37 +-
.../runtime/compress/colgroup/AColGroupOffset.java | 3 +-
.../runtime/compress/colgroup/AColGroupValue.java | 115 +---
.../compress/colgroup/AMorphingMMColGroup.java | 101 ++++
.../sysds/runtime/compress/colgroup/APreAgg.java | 111 ++--
.../runtime/compress/colgroup/ColGroupConst.java | 94 +--
.../runtime/compress/colgroup/ColGroupDDC.java | 52 +-
.../runtime/compress/colgroup/ColGroupEmpty.java | 44 +-
.../runtime/compress/colgroup/ColGroupFactory.java | 118 ++--
.../runtime/compress/colgroup/ColGroupIO.java | 2 +
.../runtime/compress/colgroup/ColGroupOLE.java | 184 +++---
.../runtime/compress/colgroup/ColGroupPFOR.java | 384 ++++++++++++
.../runtime/compress/colgroup/ColGroupRLE.java | 260 ++++++---
.../runtime/compress/colgroup/ColGroupSDC.java | 331 +++++------
.../compress/colgroup/ColGroupSDCSingle.java | 223 +++----
.../compress/colgroup/ColGroupSDCSingleZeros.java | 399 ++++++++-----
.../compress/colgroup/ColGroupSDCZeros.java | 498 +++++++++-------
.../runtime/compress/colgroup/ColGroupSizes.java | 4 +-
.../compress/colgroup/ColGroupUncompressed.java | 71 +--
.../runtime/compress/colgroup/ColGroupUtils.java | 65 +++
.../compress/colgroup/dictionary/ADictionary.java | 210 ++++++-
.../compress/colgroup/dictionary/Dictionary.java | 316 ++++++++--
.../colgroup/dictionary/DictionaryFactory.java | 12 +-
.../colgroup/dictionary/MatrixBlockDictionary.java | 647 ++++++++++++++++++++-
.../compress/colgroup/dictionary/QDictionary.java | 144 ++++-
.../colgroup/insertionsort/AInsertionSorter.java | 4 +-
.../insertionsort/InsertionSorterFactory.java | 3 +
.../colgroup/insertionsort/MaterializeSort.java | 7 +-
.../compress/colgroup/mapping/AMapToData.java | 99 +++-
.../compress/colgroup/mapping/MapToBit.java | 55 +-
.../compress/colgroup/mapping/MapToByte.java | 118 +++-
.../compress/colgroup/mapping/MapToChar.java | 79 ++-
.../compress/colgroup/mapping/MapToFactory.java | 29 +-
.../compress/colgroup/mapping/MapToInt.java | 53 +-
.../compress/colgroup/offset/AIterator.java | 52 +-
.../runtime/compress/colgroup/offset/AOffset.java | 329 ++++++++++-
.../compress/colgroup/offset/OffsetByte.java | 526 ++++++++++++++++-
.../compress/colgroup/offset/OffsetChar.java | 249 +++++++-
.../compress/colgroup/offset/OffsetFactory.java | 32 +-
.../sysds/runtime/compress/lib/CLALibAppend.java | 9 +-
.../runtime/compress/lib/CLALibBinaryCellOp.java | 78 ++-
.../sysds/runtime/compress/lib/CLALibCompAgg.java | 50 +-
.../runtime/compress/lib/CLALibDecompress.java | 209 ++++---
.../runtime/compress/lib/CLALibLeftMultBy.java | 272 +++++----
.../runtime/compress/lib/CLALibRightMultBy.java | 4 +-
.../sysds/runtime/compress/lib/CLALibSlice.java | 104 ++++
.../sysds/runtime/compress/lib/CLALibUtils.java | 112 ++--
.../runtime/matrix/data/LibMatrixBincell.java | 55 +-
.../sysds/runtime/matrix/data/MatrixBlock.java | 9 +-
src/test/java/org/apache/sysds/test/TestUtils.java | 2 +-
.../component/compress/CompressedMatrixTest.java | 12 +
.../component/compress/CompressedTestBase.java | 95 ++-
.../component/compress/ExtendedMatrixTests.java | 26 +-
.../test/component/compress/TestConstants.java | 6 +-
.../compress/colgroup/JolEstimateRLETest.java | 7 +-
.../insertionsort/TestInsertionSorters.java | 16 +-
.../compress/mapping/MappingPreAggregateTests.java | 293 +++++++++-
.../component/compress/mapping/MappingTests.java | 31 +-
.../compress/mapping/StandAloneTests.java | 5 +
.../compress/offset/OffsetNegativeTests.java | 92 ---
.../compress/offset/OffsetSingleTests.java | 17 +-
.../compress/offset/OffsetTestPreAggregate.java | 378 ++++++++++++
.../compress/offset/OffsetTestPreAggregateBit.java | 128 ++++
.../offset/OffsetTestPreAggregateByte.java | 132 +++++
.../offset/OffsetTestPreAggregateChar.java | 150 +++++
.../offset/OffsetTestPreAggregateSparse.java | 169 ++++++
...s.java => OffsetTestPreAggregateSparseBit.java} | 33 +-
.../offset/OffsetTestPreAggregateSparseByte.java | 57 ++
.../offset/OffsetTestPreAggregateSparseChar.java | 66 +++
.../component/compress/offset/OffsetTests.java | 243 +++++++-
.../offset/OffsetTestsDefaultConstructor.java | 116 ++++
.../test/functions/compress/LocalInstruction.java | 5 +-
75 files changed, 7044 insertions(+), 2143 deletions(-)
create mode 100644
src/main/java/org/apache/sysds/runtime/compress/colgroup/AMorphingMMColGroup.java
create mode 100644
src/main/java/org/apache/sysds/runtime/compress/colgroup/ColGroupPFOR.java
create mode 100644
src/main/java/org/apache/sysds/runtime/compress/colgroup/ColGroupUtils.java
create mode 100644
src/main/java/org/apache/sysds/runtime/compress/lib/CLALibSlice.java
delete mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetNegativeTests.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregate.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregateBit.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregateByte.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregateChar.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregateSparse.java
copy
src/test/java/org/apache/sysds/test/component/compress/offset/{OffsetSingleTests.java
=> OffsetTestPreAggregateSparseBit.java} (54%)
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregateSparseByte.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestPreAggregateSparseChar.java
create mode 100644
src/test/java/org/apache/sysds/test/component/compress/offset/OffsetTestsDefaultConstructor.java
