Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/DaoException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/DaoException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/DaoException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:51 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class org.apache.taverna.reference.DaoException (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class org.apache.taverna.reference.DaoException (Apache Taverna 
Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.DaoException (Apache Taverna Engine and Platform 
3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.DaoException (Apache Taverna Engine and Platform 
3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -218,17 +218,17 @@
 <td class="colLast"><span 
class="typeNameLabel">InMemoryReferenceSetDao.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/InMemoryReferenceSetDao.html#deleteReferenceSetsForWFRun-java.lang.String-">deleteReferenceSetsForWFRun</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/String.html?is-external=true";
 title="class or interface in 
java.lang">String</a>&nbsp;workflowRunId)</code>&nbsp;</td>
 </tr>
 <tr class="altColor">
-<td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ErrorDocument.html" 
title="interface in org.apache.taverna.reference">ErrorDocument</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">InMemoryErrorDocumentDao.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.html#get-org.apache.taverna.reference.T2Reference-">get</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ReferenceSet.html" 
title="interface in org.apache.taverna.reference">ReferenceSet</a></code></td>
 <td class="colLast"><span 
class="typeNameLabel">InMemoryReferenceSetDao.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/InMemoryReferenceSetDao.html#get-org.apache.taverna.reference.T2Reference-">get</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
-<tr class="altColor">
+<tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/IdentifiedList.html" 
title="interface in org.apache.taverna.reference">IdentifiedList</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&gt;</code></td>
 <td class="colLast"><span 
class="typeNameLabel">InMemoryListDao.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/InMemoryListDao.html#get-org.apache.taverna.reference.T2Reference-">get</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
+<tr class="altColor">
+<td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ErrorDocument.html" 
title="interface in org.apache.taverna.reference">ErrorDocument</a></code></td>
+<td class="colLast"><span 
class="typeNameLabel">InMemoryErrorDocumentDao.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/InMemoryErrorDocumentDao.html#get-org.apache.taverna.reference.T2Reference-">get</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
+</tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/Identified.html" 
title="interface in org.apache.taverna.reference">Identified</a></code></td>
 <td class="colLast"><span 
class="typeNameLabel">WriteQueueAspect.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/WriteQueueAspect.html#getObject-org.aspectj.lang.ProceedingJoinPoint-">getObject</a></span>(org.aspectj.lang.ProceedingJoinPoint&nbsp;pjp)</code>

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/DereferenceException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/DereferenceException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/DereferenceException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:51 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class org.apache.taverna.reference.DereferenceException (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class org.apache.taverna.reference.DereferenceException (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.DereferenceException (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.DereferenceException (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocument.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocument.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocument.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:51 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ErrorDocument (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ErrorDocument (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocument (Apache Taverna Engine and Platform 
3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocument (Apache Taverna Engine and Platform 
3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentDao.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentDao.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentDao.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:51 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ErrorDocumentDao (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ErrorDocumentDao (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocumentDao (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocumentDao (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentService.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentService.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentService.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:11 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ErrorDocumentService 
(Apache Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ErrorDocumentService 
(Apache Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocumentService (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocumentService (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentServiceCallback.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentServiceCallback.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentServiceCallback.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface 
org.apache.taverna.reference.ErrorDocumentServiceCallback (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface 
org.apache.taverna.reference.ErrorDocumentServiceCallback (Apache Taverna 
Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocumentServiceCallback (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ErrorDocumentServiceCallback (Apache Taverna 
Engine and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentServiceException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentServiceException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ErrorDocumentServiceException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:11 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class 
org.apache.taverna.reference.ErrorDocumentServiceException (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class 
org.apache.taverna.reference.ErrorDocumentServiceException (Apache Taverna 
Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.ErrorDocumentServiceException (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.ErrorDocumentServiceException (Apache Taverna 
Engine and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceBuilderSPI.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceBuilderSPI.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceBuilderSPI.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface 
org.apache.taverna.reference.ExternalReferenceBuilderSPI (Apache Taverna Engine 
and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface 
org.apache.taverna.reference.ExternalReferenceBuilderSPI (Apache Taverna Engine 
and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ExternalReferenceBuilderSPI (Apache Taverna Engine 
and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ExternalReferenceBuilderSPI (Apache Taverna Engine 
and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -156,15 +156,15 @@
 <tbody>
 <tr class="altColor">
 <td class="colFirst"><code>void</code></td>
+<td class="colLast"><span 
class="typeNameLabel">TranslationPath.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/TranslationPath.html#setBuilders-java.util.List-">setBuilders</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/util/List.html?is-external=true";
 title="class or interface in java.util">List</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceBuilderSPI.html"
 title="interface in 
org.apache.taverna.reference">ExternalReferenceBuilderSPI</a>&lt;?&gt;&gt;&nbsp;builders)</code>&nbsp;</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>void</code></td>
 <td class="colLast"><span 
class="typeNameLabel">ReferenceSetAugmentorImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.html#setBuilders-java.util.List-">setBuilders</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/util/List.html?is-external=true";
 title="class or interface in java.util">List</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceBuilderSPI.html"
 title="interface in 
org.apache.taverna.reference">ExternalReferenceBuilderSPI</a>&lt;?&gt;&gt;&nbsp;builders)</code>
 <div class="block">Inject a list containing all known implementations of
  ExternalReferenceBuilderSPI.</div>
 </td>
 </tr>
-<tr class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span 
class="typeNameLabel">TranslationPath.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/TranslationPath.html#setBuilders-java.util.List-">setBuilders</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/util/List.html?is-external=true";
 title="class or interface in java.util">List</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceBuilderSPI.html"
 title="interface in 
org.apache.taverna.reference">ExternalReferenceBuilderSPI</a>&lt;?&gt;&gt;&nbsp;builders)</code>&nbsp;</td>
-</tr>
 </tbody>
 </table>
 </li>

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceConstructionException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceConstructionException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceConstructionException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class 
org.apache.taverna.reference.ExternalReferenceConstructionException (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class 
org.apache.taverna.reference.ExternalReferenceConstructionException (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.ExternalReferenceConstructionException (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.ExternalReferenceConstructionException (Apache 
Taverna Engine and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceSPI.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceSPI.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceSPI.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ExternalReferenceSPI 
(Apache Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ExternalReferenceSPI 
(Apache Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ExternalReferenceSPI (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ExternalReferenceSPI (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -226,13 +226,13 @@ Processor.</div>
 </tr>
 <tbody>
 <tr class="altColor">
-<td class="colFirst"><code>abstract <a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">AbstractExternalReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/AbstractExternalReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
-</tr>
-<tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
 <td class="colLast"><span 
class="typeNameLabel">ExternalReferenceSPI.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html#clone--">clone</a></span>()</code>&nbsp;</td>
 </tr>
+<tr class="rowColor">
+<td class="colFirst"><code>abstract <a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
+<td class="colLast"><span 
class="typeNameLabel">AbstractExternalReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/AbstractExternalReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
+</tr>
 <tr class="altColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
 <td class="colLast"><span 
class="typeNameLabel">ValueToReferenceConverterSPI.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/ValueToReferenceConverterSPI.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
@@ -626,9 +626,9 @@ Processor.</div>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">ByteArrayToByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
+<td class="colLast"><span 
class="typeNameLabel">NumberToStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/NumberToStringReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
        <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>
-<div class="block">Return a new InlineByteArrayReference wrapping the supplied 
byte[]</div>
+<div class="block">Return a new InlineStringReference wrapping the supplied 
String</div>
 </td>
 </tr>
 <tr class="altColor">
@@ -640,9 +640,9 @@ Processor.</div>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">NumberToStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/NumberToStringReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
+<td class="colLast"><span 
class="typeNameLabel">ByteArrayToByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
        <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>
-<div class="block">Return a new InlineStringReference wrapping the supplied 
String</div>
+<div class="block">Return a new InlineByteArrayReference wrapping the supplied 
byte[]</div>
 </td>
 </tr>
 <tr class="altColor">
@@ -705,19 +705,19 @@ Processor.</div>
 <tbody>
 <tr class="altColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">GreenReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/GreenReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">RedReference.</span><code><span class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/RedReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">BlueReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/BlueReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">YellowReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/YellowReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">YellowReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/YellowReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">GreenReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/GreenReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">RedReference.</span><code><span class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/RedReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">BlueReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/BlueReference.html#clone--">clone</a></span>()</code>&nbsp;</td>
 </tr>
 </tbody>
 </table>

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceTranslatorSPI.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceTranslatorSPI.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceTranslatorSPI.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface 
org.apache.taverna.reference.ExternalReferenceTranslatorSPI (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface 
org.apache.taverna.reference.ExternalReferenceTranslatorSPI (Apache Taverna 
Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ExternalReferenceTranslatorSPI (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ExternalReferenceTranslatorSPI (Apache Taverna 
Engine and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -140,15 +140,15 @@
 <tbody>
 <tr class="altColor">
 <td class="colFirst"><code>void</code></td>
+<td class="colLast"><span 
class="typeNameLabel">TranslationPath.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/TranslationPath.html#setTranslators-java.util.List-">setTranslators</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/util/List.html?is-external=true";
 title="class or interface in java.util">List</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceTranslatorSPI.html"
 title="interface in 
org.apache.taverna.reference">ExternalReferenceTranslatorSPI</a>&lt;?,?&gt;&gt;&nbsp;translators)</code>&nbsp;</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code>void</code></td>
 <td class="colLast"><span 
class="typeNameLabel">ReferenceSetAugmentorImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ReferenceSetAugmentorImpl.html#setTranslators-java.util.List-">setTranslators</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/util/List.html?is-external=true";
 title="class or interface in java.util">List</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceTranslatorSPI.html"
 title="interface in 
org.apache.taverna.reference">ExternalReferenceTranslatorSPI</a>&lt;?,?&gt;&gt;&nbsp;translators)</code>
 <div class="block">Inject a list containing all known implementations of
  ExternalReferenceTranslatorSPI.</div>
 </td>
 </tr>
-<tr class="rowColor">
-<td class="colFirst"><code>void</code></td>
-<td class="colLast"><span 
class="typeNameLabel">TranslationPath.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/TranslationPath.html#setTranslators-java.util.List-">setTranslators</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/util/List.html?is-external=true";
 title="class or interface in java.util">List</a>&lt;<a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceTranslatorSPI.html"
 title="interface in 
org.apache.taverna.reference">ExternalReferenceTranslatorSPI</a>&lt;?,?&gt;&gt;&nbsp;translators)</code>&nbsp;</td>
-</tr>
 </tbody>
 </table>
 </li>

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceValidationException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceValidationException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ExternalReferenceValidationException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class 
org.apache.taverna.reference.ExternalReferenceValidationException (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class 
org.apache.taverna.reference.ExternalReferenceValidationException (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.ExternalReferenceValidationException (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.ExternalReferenceValidationException (Apache 
Taverna Engine and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/Identified.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/Identified.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/Identified.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.Identified (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.Identified (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.Identified (Apache Taverna Engine and Platform 
3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.Identified (Apache Taverna Engine and Platform 
3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/IdentifiedList.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/IdentifiedList.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/IdentifiedList.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:11 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.IdentifiedList (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.IdentifiedList (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.IdentifiedList (Apache Taverna Engine and Platform 
3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.IdentifiedList (Apache Taverna Engine and Platform 
3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListDao.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListDao.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListDao.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ListDao (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ListDao (Apache Taverna 
Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ListDao (Apache Taverna Engine and Platform 
3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ListDao (Apache Taverna Engine and Platform 
3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListService.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListService.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListService.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ListService (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ListService (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ListService (Apache Taverna Engine and Platform 
3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ListService (Apache Taverna Engine and Platform 
3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListServiceCallback.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListServiceCallback.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListServiceCallback.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ListServiceCallback 
(Apache Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ListServiceCallback 
(Apache Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ListServiceCallback (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ListServiceCallback (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListServiceException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListServiceException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ListServiceException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class org.apache.taverna.reference.ListServiceException (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class org.apache.taverna.reference.ListServiceException (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.ListServiceException (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.ListServiceException (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceContext.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceContext.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceContext.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ReferenceContext (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ReferenceContext (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ReferenceContext (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ReferenceContext (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -654,9 +654,9 @@ filesystem</div>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">ByteArrayToByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#canConvert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">canConvert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
+<td class="colLast"><span 
class="typeNameLabel">NumberToStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/NumberToStringReference.html#canConvert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">canConvert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
           <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>
-<div class="block">Can convert if the object is an instance of byte[]</div>
+<div class="block">Can convert if the object is an instance of 
java.lang.Number</div>
 </td>
 </tr>
 <tr class="altColor">
@@ -668,9 +668,9 @@ filesystem</div>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">NumberToStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/NumberToStringReference.html#canConvert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">canConvert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
+<td class="colLast"><span 
class="typeNameLabel">ByteArrayToByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#canConvert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">canConvert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
           <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>
-<div class="block">Can convert if the object is an instance of 
java.lang.Number</div>
+<div class="block">Can convert if the object is an instance of byte[]</div>
 </td>
 </tr>
 <tr class="altColor">
@@ -689,9 +689,9 @@ filesystem</div>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">ByteArrayToByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
+<td class="colLast"><span 
class="typeNameLabel">NumberToStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/NumberToStringReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
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        <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>
-<div class="block">Return a new InlineByteArrayReference wrapping the supplied 
byte[]</div>
+<div class="block">Return a new InlineStringReference wrapping the supplied 
String</div>
 </td>
 </tr>
 <tr class="rowColor">
@@ -703,9 +703,9 @@ filesystem</div>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/ExternalReferenceSPI.html" 
title="interface in 
org.apache.taverna.reference">ExternalReferenceSPI</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">NumberToStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/NumberToStringReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
 title="class or interface in java.lang">Object</a>&nbsp;o,
+<td class="colLast"><span 
class="typeNameLabel">ByteArrayToByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/ByteArrayToByteArrayReference.html#convert-java.lang.Object-org.apache.taverna.reference.ReferenceContext-">convert</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true";
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        <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>
-<div class="block">Return a new InlineStringReference wrapping the supplied 
String</div>
+<div class="block">Return a new InlineByteArrayReference wrapping the supplied 
byte[]</div>
 </td>
 </tr>
 <tr class="rowColor">
@@ -726,42 +726,42 @@ filesystem</div>
                <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReference.html"
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org.apache.taverna.reference.impl.external.object">InlineByteArrayReference</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">InlineByteArrayReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReferenceBuilder.html#createReference-java.io.InputStream-org.apache.taverna.reference.ReferenceContext-">createReference</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
 title="class or interface in java.io">InputStream</a>&nbsp;byteStream,
+<td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReference.html"
 title="class in 
org.apache.taverna.reference.impl.external.object">InlineStringReference</a></code></td>
+<td class="colLast"><span 
class="typeNameLabel">InlineStringReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReferenceBuilder.html#createReference-java.io.InputStream-org.apache.taverna.reference.ReferenceContext-">createReference</a></span>(<a
 
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href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReference.html"
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org.apache.taverna.reference.impl.external.object">InlineStringReference</a></code></td>
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class="typeNameLabel">InlineStringReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReferenceBuilder.html#createReference-java.io.InputStream-org.apache.taverna.reference.ReferenceContext-">createReference</a></span>(<a
 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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+<td class="colFirst"><code><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReference.html"
 title="class in 
org.apache.taverna.reference.impl.external.object">InlineByteArrayReference</a></code></td>
+<td class="colLast"><span 
class="typeNameLabel">InlineByteArrayReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReferenceBuilder.html#createReference-java.io.InputStream-org.apache.taverna.reference.ReferenceContext-">createReference</a></span>(<a
 
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                <a 
href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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-<td class="colLast"><span 
class="typeNameLabel">InlineByteArrayReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReferenceBuilder.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">InlineStringToInlineByteTranslator.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringToInlineByteTranslator.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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-<td class="colLast"><span 
class="typeNameLabel">InlineByteToInlineStringTranslator.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteToInlineStringTranslator.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">InlineStringReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReferenceBuilder.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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class="typeNameLabel">InlineStringToInlineByteTranslator.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringToInlineByteTranslator.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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class="typeNameLabel">InlineByteToInlineStringTranslator.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteToInlineStringTranslator.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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class="typeNameLabel">InlineStringReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReferenceBuilder.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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class="typeNameLabel">InlineByteArrayReferenceBuilder.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReferenceBuilder.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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+<td class="colLast"><span 
class="typeNameLabel">VMObjectReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/VMObjectReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
+</tr>
+<tr class="rowColor">
+<td class="colFirst"><code><a 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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class="typeNameLabel">InlineStringReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineStringReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
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over the string
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-<td class="colFirst"><code><a 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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class="typeNameLabel">VMObjectReference.</span><code><span 
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
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 <td class="colFirst"><code><a 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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class="typeNameLabel">InlineByteArrayReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/external/object/InlineByteArrayReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;context)</code>&nbsp;</td>
@@ -795,38 +795,38 @@ filesystem</div>
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 <tr class="altColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">GreenBuilder.</span><code><span class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/GreenBuilder.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
-<div class="block">Doesn't use any context resources so is always enabled</div>
-</td>
+<td class="colLast"><span class="typeNameLabel">GreenToRed.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/GreenToRed.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>&nbsp;</td>
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>&nbsp;</td>
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href="../../../../../org/apache/taverna/t2referencetest/GreenBuilder.html#isEnabled-org.apache.taverna.reference.ReferenceContext-">isEnabled</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
+<div class="block">Doesn't use any context resources so is always enabled</div>
+</td>
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 <tr class="altColor">
 <td class="colFirst"><code><a 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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class="typeNameLabel">GreenReference.</span><code><span 
class="memberNameLink"><a 
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
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href="../../../../../org/apache/taverna/t2referencetest/RedReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
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over the string
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href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
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class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/BlueReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
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title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
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class="typeNameLabel">YellowReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/YellowReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
 href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
 <div class="block">Fakes a de-reference operation, returning a byte stream 
over the string
  data.</div>
 </td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code><a 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
 title="class or interface in java.io">InputStream</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">YellowReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/YellowReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
 href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
+<td class="colLast"><span 
class="typeNameLabel">GreenReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/GreenReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
 href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
 <div class="block">Fakes a de-reference operation, returning a byte stream 
over the string
  data.</div>
 </td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code><a 
href="http://docs.oracle.com/javase/7/docs/api/java/io/InputStream.html?is-external=true";
 title="class or interface in java.io">InputStream</a></code></td>
-<td class="colLast"><span 
class="typeNameLabel">RedReference.</span><code><span class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/RedReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
 href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
+<td class="colLast"><span 
class="typeNameLabel">BlueReference.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/t2referencetest/BlueReference.html#openStream-org.apache.taverna.reference.ReferenceContext-">openStream</a></span>(<a
 href="../../../../../org/apache/taverna/reference/ReferenceContext.html" 
title="interface in 
org.apache.taverna.reference">ReferenceContext</a>&nbsp;arg0)</code>
 <div class="block">Fakes a de-reference operation, returning a byte stream 
over the string
  data.</div>
 </td>

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceService.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceService.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceService.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface org.apache.taverna.reference.ReferenceService (Apache 
Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface org.apache.taverna.reference.ReferenceService (Apache 
Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ReferenceService (Apache Taverna Engine and 
Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ReferenceService (Apache Taverna Engine and 
Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -232,10 +232,10 @@ specification.</div>
 </tr>
 <tbody>
 <tr class="altColor">
-<td class="colLast"><code><span class="memberNameLink"><a 
href="../../../../../org/apache/taverna/platform/execution/impl/local/LocalExecution.html#LocalExecution-org.apache.taverna.scufl2.api.container.WorkflowBundle-org.apache.taverna.scufl2.api.core.Workflow-org.apache.taverna.scufl2.api.profiles.Profile-org.apache.taverna.robundle.Bundle-org.apache.taverna.reference.ReferenceService-org.apache.taverna.workflowmodel.Edits-org.apache.taverna.platform.capability.api.ActivityService-org.apache.taverna.platform.capability.api.DispatchLayerService-">LocalExecution</a></span>(org.apache.taverna.scufl2.api.container.WorkflowBundle&nbsp;workflowBundle,
-              org.apache.taverna.scufl2.api.core.Workflow&nbsp;workflow,
-              org.apache.taverna.scufl2.api.profiles.Profile&nbsp;profile,
-              org.apache.taverna.robundle.Bundle&nbsp;dataBundle,
+<td class="colLast"><code><span class="memberNameLink"><a 
href="../../../../../org/apache/taverna/platform/execution/impl/local/LocalExecution.html#LocalExecution-org.apache.taverna.scufl2.api.container.WorkflowBundle-org.apache.taverna.scufl2.api.core.Workflow-org.apache.taverna.scufl2.api.profiles.Profile-org.apache.taverna.robundle.Bundle-org.apache.taverna.reference.ReferenceService-org.apache.taverna.workflowmodel.Edits-org.apache.taverna.platform.capability.api.ActivityService-org.apache.taverna.platform.capability.api.DispatchLayerService-">LocalExecution</a></span>(<a
 
href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/container/WorkflowBundle.html?is-external=true";
 title="class or interface in 
org.apache.taverna.scufl2.api.container">WorkflowBundle</a>&nbsp;workflowBundle,
+              <a 
href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/core/Workflow.html?is-external=true";
 title="class or interface in 
org.apache.taverna.scufl2.api.core">Workflow</a>&nbsp;workflow,
+              <a 
href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/scufl2/api/profiles/Profile.html?is-external=true";
 title="class or interface in 
org.apache.taverna.scufl2.api.profiles">Profile</a>&nbsp;profile,
+              <a 
href="https://taverna.incubator.apache.org/javadoc/taverna-language/org/apache/taverna/robundle/Bundle.html?is-external=true";
 title="class or interface in 
org.apache.taverna.robundle">Bundle</a>&nbsp;dataBundle,
               <a 
href="../../../../../org/apache/taverna/reference/ReferenceService.html" 
title="interface in 
org.apache.taverna.reference">ReferenceService</a>&nbsp;referenceService,
               <a 
href="../../../../../org/apache/taverna/workflowmodel/Edits.html" 
title="interface in org.apache.taverna.workflowmodel">Edits</a>&nbsp;edits,
               <a 
href="../../../../../org/apache/taverna/platform/capability/api/ActivityService.html"
 title="interface in 
org.apache.taverna.platform.capability.api">ActivityService</a>&nbsp;activityService,

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceServiceCacheProvider.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceServiceCacheProvider.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceServiceCacheProvider.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Interface 
org.apache.taverna.reference.ReferenceServiceCacheProvider (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Interface 
org.apache.taverna.reference.ReferenceServiceCacheProvider (Apache Taverna 
Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ReferenceServiceCacheProvider (Apache Taverna 
Engine and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Interface 
org.apache.taverna.reference.ReferenceServiceCacheProvider (Apache Taverna 
Engine and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {

Modified: 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceServiceException.html
==============================================================================
--- 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceServiceException.html
 (original)
+++ 
websites/staging/taverna/trunk/content/javadoc/taverna-engine/org/apache/taverna/reference/class-use/ReferenceServiceException.html
 Thu Jun 30 15:28:47 2016
@@ -2,10 +2,10 @@
 <!-- NewPage -->
 <html lang="en">
 <head>
-<!-- Generated by javadoc (1.8.0_72-internal) on Mon Mar 14 13:56:12 GMT 2016 
-->
+<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 15:53:50 BST 2016 -->
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
-<title>Uses of Class org.apache.taverna.reference.ReferenceServiceException 
(Apache Taverna Engine and Platform 3.1.0-incubating-SNAPSHOT API)</title>
-<meta name="date" content="2016-03-14">
+<title>Uses of Class org.apache.taverna.reference.ReferenceServiceException 
(Apache Taverna Engine and Platform 3.1.0-incubating API)</title>
+<meta name="date" content="2016-06-30">
 <link rel="stylesheet" type="text/css" href="../../../../../stylesheet.css" 
title="Style">
 <script type="text/javascript" src="../../../../../script.js"></script>
 </head>
@@ -13,7 +13,7 @@
 <script type="text/javascript"><!--
     try {
         if (location.href.indexOf('is-external=true') == -1) {
-            parent.document.title="Uses of Class 
org.apache.taverna.reference.ReferenceServiceException (Apache Taverna Engine 
and Platform 3.1.0-incubating-SNAPSHOT API)";
+            parent.document.title="Uses of Class 
org.apache.taverna.reference.ReferenceServiceException (Apache Taverna Engine 
and Platform 3.1.0-incubating API)";
         }
     }
     catch(err) {
@@ -136,7 +136,7 @@
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">ErrorDocumentService.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/ErrorDocumentService.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">ReferenceService.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/ReferenceService.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>boolean</code></td>
@@ -144,7 +144,7 @@
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">ReferenceService.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/ReferenceService.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">ErrorDocumentService.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/ErrorDocumentService.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>void</code></td>
@@ -243,15 +243,15 @@
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">ReferenceServiceImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ReferenceServiceImpl.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">ReferenceSetServiceImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ReferenceSetServiceImpl.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">ListServiceImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ListServiceImpl.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">ReferenceServiceImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ReferenceServiceImpl.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
 <tr class="rowColor">
 <td class="colFirst"><code>boolean</code></td>
-<td class="colLast"><span 
class="typeNameLabel">ReferenceSetServiceImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ReferenceSetServiceImpl.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
+<td class="colLast"><span 
class="typeNameLabel">ListServiceImpl.</span><code><span 
class="memberNameLink"><a 
href="../../../../../org/apache/taverna/reference/impl/ListServiceImpl.html#delete-org.apache.taverna.reference.T2Reference-">delete</a></span>(<a
 href="../../../../../org/apache/taverna/reference/T2Reference.html" 
title="interface in 
org.apache.taverna.reference">T2Reference</a>&nbsp;reference)</code>&nbsp;</td>
 </tr>
 <tr class="altColor">
 <td class="colFirst"><code>boolean</code></td>



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