Added: websites/staging/taverna/trunk/content/javadoc/taverna-commandline/index-all.html ============================================================================== --- websites/staging/taverna/trunk/content/javadoc/taverna-commandline/index-all.html (added) +++ websites/staging/taverna/trunk/content/javadoc/taverna-commandline/index-all.html Thu Jun 30 15:59:17 2016 @@ -0,0 +1,543 @@ +<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd";> +<!-- NewPage --> +<html lang="en"> +<head> +<!-- Generated by javadoc (1.8.0_91) on Thu Jun 30 16:50:23 BST 2016 --> +<meta http-equiv="Content-Type" content="text/html; charset=UTF-8"> +<title>Index (Apache Taverna Command-line Tool 3.1.0-incubating API)</title> +<meta name="date" content="2016-06-30"> +<link rel="stylesheet" type="text/css" href="stylesheet.css" title="Style"> +<script type="text/javascript" src="script.js"></script> +</head> +<body> +<script type="text/javascript"><!-- + try { + if (location.href.indexOf('is-external=true') == -1) { + parent.document.title="Index (Apache Taverna Command-line Tool 3.1.0-incubating API)"; + } + } + catch(err) { + } +//--> +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="overview-summary.html">Overview</a></li> +<li>Package</li> +<li>Class</li> +<li>Use</li> +<li><a href="overview-tree.html">Tree</a></li> +<li><a href="deprecated-list.html">Deprecated</a></li> +<li class="navBarCell1Rev">Index</li> +<li><a href="help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li>Prev</li> +<li>Next</li> +</ul> +<ul class="navList"> +<li><a href="index.html?index-all.html" target="_top">Frames</a></li> +<li><a href="index-all.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_top"> +<li><a href="allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_top"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<div class="contentContainer"><a href="#I:A">A</a> <a href="#I:B">B</a> <a href="#I:C">C</a> <a href="#I:D">D</a> <a href="#I:E">E</a> <a href="#I:G">G</a> <a href="#I:H">H</a> <a href="#I:I">I</a> <a href="#I:M">M</a> <a href="#I:O">O</a> <a href="#I:R">R</a> <a href="#I:S">S</a> <a href="#I:T">T</a> <a href="#I:U">U</a> <a href="#I:V">V</a> <a name="I:A"> +<!-- --> +</a> +<h2 class="title">A</h2> +<dl> +<dt><a href="org/apache/taverna/commandline/exceptions/ArgumentsParsingException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">ArgumentsParsingException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/ArgumentsParsingException.html#ArgumentsParsingException-java.lang.String-">ArgumentsParsingException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/ArgumentsParsingException.html" title="class in org.apache.taverna.commandline.exceptions">ArgumentsParsingException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/ArgumentsParsingException.html#ArgumentsParsingException-java.lang.String-java.lang.Throwable-">ArgumentsParsingException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/ArgumentsParsingException.html" title="class in org.apache.taverna.commandline.exceptions">ArgumentsParsingException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#askedForHelp--">askedForHelp()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#askedForHelp--">askedForHelp()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +</dl> +<a name="I:B"> +<!-- --> +</a> +<h2 class="title">B</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/ErrorValueHandler.html#buildErrorValueString-org.apache.taverna.databundle.ErrorDocument-">buildErrorValueString(ErrorDocument)</a></span> - Static method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/ErrorValueHandler.html" title="class in org.apache.taverna.commandline.data">ErrorValueHandler</a></dt> +<dd> +<div class="block">Creates a string representation of the ErrorValue.</div> +</dd> +</dl> +<a name="I:C"> +<!-- --> +</a> +<h2 class="title">C</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#checkForInvalid--">checkForInvalid()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/InputsHandler.html#checkProvidedInputs-java.util.Map-org.apache.taverna.commandline.options.CommandLineOptions-">checkProvidedInputs(Map<String, InputWorkflowPort>, CommandLineOptions)</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/InputsHandler.html" title="class in org.apache.taverna.commandline.data">InputsHandler</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/exceptions/CommandLineMasterPasswordException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">CommandLineMasterPasswordException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/CommandLineMasterPasswordException.html#CommandLineMasterPasswordException-java.lang.String-">CommandLineMasterPasswordException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/CommandLineMasterPasswordException.html" title="class in org.apache.taverna.commandline.exceptions">CommandLineMasterPasswordException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/CommandLineMasterPasswordException.html#CommandLineMasterPasswordException-java.lang.String-java.lang.Throwable-">CommandLineMasterPasswordException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/CommandLineMasterPasswordException.html" title="class in org.apache.taverna.commandline.exceptions">CommandLineMasterPasswordException</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">CommandLineMasterPasswordProvider</span></a> - Class in <a href="org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></dt> +<dd> +<div class="block">An implementation of <a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager"><code>MasterPasswordProvider</code></a> that reads Credential Manager's + master password from stdin (pipe or terminal) is -cmpassword option is present in command + line arguments.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#CommandLineMasterPasswordProvider-org.apache.taverna.commandline.options.CommandLineOptions-">CommandLineMasterPasswordProvider(CommandLineOptions)</a></span> - Constructor for class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" title="class in org.apache.taverna.commandline">CommandLineMasterPasswordProvider</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options"><span class="typeNameLink">CommandLineOptions</span></a> - Interface in <a href="org/apache/taverna/commandline/options/package-summary.html">org.apache.taverna.commandline.options</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">CommandLineOptionsImpl</span></a> - Class in <a href="org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></dt> +<dd> +<div class="block">Handles the processing of command line arguments for enacting a workflow.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#CommandLineOptionsImpl-java.lang.String:A-">CommandLineOptionsImpl(String[])</a></span> - Constructor for class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">CommandLineTool</span></a> - Class in <a href="org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></dt> +<dd> +<div class="block">A utility class that wraps the process of executing a workflow, allowing workflows to be easily + executed independently of the GUI.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#CommandLineTool--">CommandLineTool()</a></span> - Constructor for class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/CommandLineUtils.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">CommandLineUtils</span></a> - Class in <a href="org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineUtils.html#CommandLineUtils--">CommandLineUtils()</a></span> - Constructor for class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineUtils.html" title="class in org.apache.taverna.commandline">CommandLineUtils</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#configureDatabase--">configureDatabase()</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#CREDENTIAL_MANAGER_DIR_OPTION">CREDENTIAL_MANAGER_DIR_OPTION</a></span> - Static variable in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#CREDENTIAL_MANAGER_PASSWORD_OPTION">CREDENTIAL_MANAGER_PASSWORD_OPTION</a></span> - Static variable in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +</dl> +<a name="I:D"> +<!-- --> +</a> +<h2 class="title">D</h2> +<dl> +<dt><a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">DatabaseConfigurationException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html#DatabaseConfigurationException--">DatabaseConfigurationException()</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html" title="class in org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html#DatabaseConfigurationException-java.lang.String-">DatabaseConfigurationException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html" title="class in org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html#DatabaseConfigurationException-java.lang.Throwable-">DatabaseConfigurationException(Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html" title="class in org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html#DatabaseConfigurationException-java.lang.String-java.lang.Throwable-">DatabaseConfigurationException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/DatabaseConfigurationException.html" title="class in org.apache.taverna.commandline.exceptions">DatabaseConfigurationException</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data"><span class="typeNameLink">DatabaseConfigurationHandler</span></a> - Class in <a href="org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a></dt> +<dd> +<div class="block">Handles the initialisation and configuration of the data source according to + the command line arguments, or a properties file.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#DatabaseConfigurationHandler-org.apache.taverna.commandline.options.CommandLineOptions-org.apache.taverna.configuration.database.DatabaseConfiguration-org.apache.taverna.configuration.database.DatabaseManager-">DatabaseConfigurationHandler(CommandLineOptions, DatabaseConfiguration, DatabaseManager)</a></span> - Constructor for class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#displayHelp--">displayHelp()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#displayHelp-boolean-">displayHelp(boolean)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#displayHelp--">displayHelp()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#displayHelp-boolean-">displayHelp(boolean)</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +</dl> +<a name="I:E"> +<!-- --> +</a> +<h2 class="title">E</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#error-java.lang.String-">error(String)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#error-java.lang.String-java.lang.Throwable-">error(String, Throwable)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#error-java.lang.Throwable-">error(Throwable)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/data/ErrorValueHandler.html" title="class in org.apache.taverna.commandline.data"><span class="typeNameLink">ErrorValueHandler</span></a> - Class in <a href="org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a></dt> +<dd> +<div class="block">Handles ErrorValues and transforming them into String representations + that can be stored as a file, or within a Baclava document.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/ErrorValueHandler.html#ErrorValueHandler--">ErrorValueHandler()</a></span> - Constructor for class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/ErrorValueHandler.html" title="class in org.apache.taverna.commandline.data">ErrorValueHandler</a></dt> +<dd> </dd> +</dl> +<a name="I:G"> +<!-- --> +</a> +<h2 class="title">G</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getArgs--">getArgs()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getArgs--">getArgs()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getCredentialManagerDir--">getCredentialManagerDir()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getCredentialManagerDir--">getCredentialManagerDir()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getDatabasePort--">getDatabasePort()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getDatabasePort--">getDatabasePort()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getDatabaseProperties--">getDatabaseProperties()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getDatabaseProperties--">getDatabaseProperties()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#getDBConfig--">getDBConfig()</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getInputBundle--">getInputBundle()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getInputBundle--">getInputBundle()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> +<div class="block">Return the path for a data bundle which should be used for + input values.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getInputFiles--">getInputFiles()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> +<div class="block">Returns an array that alternates between a portname and path to a file + containing the input values.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getInputFiles--">getInputFiles()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> +<div class="block">Returns an array that alternates between a portname and path to a file + containing the input values.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getInputValues--">getInputValues()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getInputValues--">getInputValues()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> +<div class="block">Returns an array that alternates between a portname and an + input values.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getLogFile--">getLogFile()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getLogFile--">getLogFile()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#getMasterPassword-boolean-">getMasterPassword(boolean)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" title="class in org.apache.taverna.commandline">CommandLineMasterPasswordProvider</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/InputMismatchException.html#getMessage--">getMessage()</a></span> - Method in exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/InputMismatchException.html" title="class in org.apache.taverna.commandline.exceptions">InputMismatchException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getOptions--">getOptions()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getOutputDirectory--">getOutputDirectory()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getOutputDirectory--">getOutputDirectory()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#getProviderPriority--">getProviderPriority()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" title="class in org.apache.taverna.commandline">CommandLineMasterPasswordProvider</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getSaveResultsToBundle--">getSaveResultsToBundle()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getSaveResultsToBundle--">getSaveResultsToBundle()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getStartDatabase--">getStartDatabase()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getStartDatabase--">getStartDatabase()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getStartDatabaseOnly--">getStartDatabaseOnly()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getStartDatabaseOnly--">getStartDatabaseOnly()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#getWorkflow--">getWorkflow()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#getWorkflow--">getWorkflow()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +</dl> +<a name="I:H"> +<!-- --> +</a> +<h2 class="title">H</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasDelimiterFor-java.lang.String-">hasDelimiterFor(String)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasDelimiterFor-java.lang.String-">hasDelimiterFor(String)</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasInputBundle--">hasInputBundle()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasInputBundle--">hasInputBundle()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasInputFiles--">hasInputFiles()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasInputFiles--">hasInputFiles()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasInputValues--">hasInputValues()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasInputValues--">hasInputValues()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasLogFile--">hasLogFile()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasLogFile--">hasLogFile()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasOption-java.lang.String-">hasOption(String)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasOption-java.lang.String-">hasOption(String)</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#hasSaveResultsToBundle--">hasSaveResultsToBundle()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#hasSaveResultsToBundle--">hasSaveResultsToBundle()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +</dl> +<a name="I:I"> +<!-- --> +</a> +<h2 class="title">I</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#inputDelimiter-java.lang.String-">inputDelimiter(String)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#inputDelimiter-java.lang.String-">inputDelimiter(String)</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/exceptions/InputMismatchException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">InputMismatchException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/InputMismatchException.html#InputMismatchException-java.lang.String-java.util.Set-java.util.Set-">InputMismatchException(String, Set<String>, Set<String>)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/InputMismatchException.html" title="class in org.apache.taverna.commandline.exceptions">InputMismatchException</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/data/InputsHandler.html" title="class in org.apache.taverna.commandline.data"><span class="typeNameLink">InputsHandler</span></a> - Class in <a href="org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a></dt> +<dd> +<div class="block">Handles the reading, or processing, or input values according to arguments provided to the + commandline.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/InputsHandler.html#InputsHandler--">InputsHandler()</a></span> - Constructor for class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/InputsHandler.html" title="class in org.apache.taverna.commandline.data">InputsHandler</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/exceptions/InvalidOptionException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">InvalidOptionException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/InvalidOptionException.html#InvalidOptionException-java.lang.String-">InvalidOptionException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/InvalidOptionException.html" title="class in org.apache.taverna.commandline.exceptions">InvalidOptionException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#isClientServer--">isClientServer()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#isClientServer--">isClientServer()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#isEmbedded--">isEmbedded()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#isEmbedded--">isEmbedded()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#isInMemory--">isInMemory()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#isInMemory--">isInMemory()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#isProvenanceEnabled--">isProvenanceEnabled()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#isProvenanceEnabled--">isProvenanceEnabled()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> </dd> +</dl> +<a name="I:M"> +<!-- --> +</a> +<h2 class="title">M</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/TavernaCommandLine.html#main-java.lang.String:A-">main(String[])</a></span> - Static method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/TavernaCommandLine.html" title="class in org.apache.taverna.commandline">TavernaCommandLine</a></dt> +<dd> +<div class="block">Starts the Taverna Command-line Tool.</div> +</dd> +</dl> +<a name="I:O"> +<!-- --> +</a> +<h2 class="title">O</h2> +<dl> +<dt><a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">OpenDataflowException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html#OpenDataflowException--">OpenDataflowException()</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html" title="class in org.apache.taverna.commandline.exceptions">OpenDataflowException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html#OpenDataflowException-java.lang.String-">OpenDataflowException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html" title="class in org.apache.taverna.commandline.exceptions">OpenDataflowException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html#OpenDataflowException-java.lang.Throwable-">OpenDataflowException(Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html" title="class in org.apache.taverna.commandline.exceptions">OpenDataflowException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html#OpenDataflowException-java.lang.String-java.lang.Throwable-">OpenDataflowException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/OpenDataflowException.html" title="class in org.apache.taverna.commandline.exceptions">OpenDataflowException</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a> - package org.apache.taverna.commandline</dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a> - package org.apache.taverna.commandline.data</dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a> - package org.apache.taverna.commandline.exceptions</dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/options/package-summary.html">org.apache.taverna.commandline.options</a> - package org.apache.taverna.commandline.options</dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#overrideDefaults--">overrideDefaults()</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +</dl> +<a name="I:R"> +<!-- --> +</a> +<h2 class="title">R</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#readConfigirationFromFile-java.lang.String-">readConfigirationFromFile(String)</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/exceptions/ReadInputException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">ReadInputException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/ReadInputException.html#ReadInputException-java.lang.String-">ReadInputException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/ReadInputException.html" title="class in org.apache.taverna.commandline.exceptions">ReadInputException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/ReadInputException.html#ReadInputException-java.lang.String-java.lang.Throwable-">ReadInputException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/ReadInputException.html" title="class in org.apache.taverna.commandline.exceptions">ReadInputException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/InputsHandler.html#registerInputs-java.util.Map-org.apache.taverna.commandline.options.CommandLineOptions-">registerInputs(Map<String, InputWorkflowPort>, CommandLineOptions)</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/InputsHandler.html" title="class in org.apache.taverna.commandline.data">InputsHandler</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#run--">run()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +</dl> +<a name="I:S"> +<!-- --> +</a> +<h2 class="title">S</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineUtils.html#safeIsSameFile-java.nio.file.Path-java.nio.file.Path-">safeIsSameFile(Path, Path)</a></span> - Static method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineUtils.html" title="class in org.apache.taverna.commandline">CommandLineUtils</a></dt> +<dd> </dd> +<dt><a href="org/apache/taverna/commandline/exceptions/SaveResultsException.html" title="class in org.apache.taverna.commandline.exceptions"><span class="typeNameLink">SaveResultsException</span></a> - Exception in <a href="org/apache/taverna/commandline/exceptions/package-summary.html">org.apache.taverna.commandline.exceptions</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/SaveResultsException.html#SaveResultsException-java.lang.String-">SaveResultsException(String)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/SaveResultsException.html" title="class in org.apache.taverna.commandline.exceptions">SaveResultsException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/exceptions/SaveResultsException.html#SaveResultsException-java.lang.String-java.lang.Throwable-">SaveResultsException(String, Throwable)</a></span> - Constructor for exception org.apache.taverna.commandline.exceptions.<a href="org/apache/taverna/commandline/exceptions/SaveResultsException.html" title="class in org.apache.taverna.commandline.exceptions">SaveResultsException</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/SaveResultsHandler.html#saveResultsForPort-java.lang.String-java.nio.file.Path-">saveResultsForPort(String, Path)</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/SaveResultsHandler.html" title="class in org.apache.taverna.commandline.data">SaveResultsHandler</a></dt> +<dd> +<div class="block">Given the Data on an output port, saves the data on a disk in the + output directory.</div> +</dd> +<dt><a href="org/apache/taverna/commandline/data/SaveResultsHandler.html" title="class in org.apache.taverna.commandline.data"><span class="typeNameLink">SaveResultsHandler</span></a> - Class in <a href="org/apache/taverna/commandline/data/package-summary.html">org.apache.taverna.commandline.data</a></dt> +<dd> +<div class="block">Handles all recording of results as they are received by the <code>CommandLineResultListener</code> or + when the workflow enactment has completed.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/SaveResultsHandler.html#SaveResultsHandler-java.io.File-">SaveResultsHandler(File)</a></span> - Constructor for class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/SaveResultsHandler.html" title="class in org.apache.taverna.commandline.data">SaveResultsHandler</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html#saveResultsToDirectory--">saveResultsToDirectory()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline">CommandLineOptionsImpl</a></dt> +<dd> +<div class="block">Save the results to a directory if -outputdir has been explicitly defined, + or if -bundlec has not been defined.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/options/CommandLineOptions.html#saveResultsToDirectory--">saveResultsToDirectory()</a></span> - Method in interface org.apache.taverna.commandline.options.<a href="org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a></dt> +<dd> +<div class="block">Save the results to a directory if -outputdir has been explicitly defined, + or if -outputdoc has not been defined.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setCommandLineOptions-org.apache.taverna.commandline.options.CommandLineOptions-">setCommandLineOptions(CommandLineOptions)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setCredentialManager-org.apache.taverna.security.credentialmanager.CredentialManager-">setCredentialManager(CredentialManager)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setDatabaseConfiguration-org.apache.taverna.configuration.database.DatabaseConfiguration-">setDatabaseConfiguration(DatabaseConfiguration)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> +<div class="block">Sets the databaseConfiguration.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setDatabaseManager-org.apache.taverna.configuration.database.DatabaseManager-">setDatabaseManager(DatabaseManager)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> +<div class="block">Sets the databaseManager.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#setMasterPassword-java.lang.String-">setMasterPassword(String)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" title="class in org.apache.taverna.commandline">CommandLineMasterPasswordProvider</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setRunService-org.apache.taverna.platform.run.api.RunService-">setRunService(RunService)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setupAndExecute--">setupAndExecute()</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#setWorkflowBundleIO-org.apache.taverna.scufl2.api.io.WorkflowBundleIO-">setWorkflowBundleIO(WorkflowBundleIO)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +</dl> +<a name="I:T"> +<!-- --> +</a> +<h2 class="title">T</h2> +<dl> +<dt><a href="org/apache/taverna/commandline/TavernaCommandLine.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">TavernaCommandLine</span></a> - Class in <a href="org/apache/taverna/commandline/package-summary.html">org.apache.taverna.commandline</a></dt> +<dd> +<div class="block">Main entry point for starting the Taverna Command-line Tool.</div> +</dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/TavernaCommandLine.html#TavernaCommandLine--">TavernaCommandLine()</a></span> - Constructor for class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/TavernaCommandLine.html" title="class in org.apache.taverna.commandline">TavernaCommandLine</a></dt> +<dd> </dd> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#testDatabaseConnection--">testDatabaseConnection()</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +</dl> +<a name="I:U"> +<!-- --> +</a> +<h2 class="title">U</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html#useOptions--">useOptions()</a></span> - Method in class org.apache.taverna.commandline.data.<a href="org/apache/taverna/commandline/data/DatabaseConfigurationHandler.html" title="class in org.apache.taverna.commandline.data">DatabaseConfigurationHandler</a></dt> +<dd> </dd> +</dl> +<a name="I:V"> +<!-- --> +</a> +<h2 class="title">V</h2> +<dl> +<dt><span class="memberNameLink"><a href="org/apache/taverna/commandline/CommandLineTool.html#validateWorkflowBundle-org.apache.taverna.scufl2.api.container.WorkflowBundle-">validateWorkflowBundle(WorkflowBundle)</a></span> - Method in class org.apache.taverna.commandline.<a href="org/apache/taverna/commandline/CommandLineTool.html" title="class in org.apache.taverna.commandline">CommandLineTool</a></dt> +<dd> </dd> +</dl> +<a href="#I:A">A</a> <a href="#I:B">B</a> <a href="#I:C">C</a> <a href="#I:D">D</a> <a href="#I:E">E</a> <a href="#I:G">G</a> <a href="#I:H">H</a> <a href="#I:I">I</a> <a href="#I:M">M</a> <a href="#I:O">O</a> <a href="#I:R">R</a> <a href="#I:S">S</a> <a href="#I:T">T</a> <a href="#I:U">U</a> <a href="#I:V">V</a> </div> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="overview-summary.html">Overview</a></li> +<li>Package</li> +<li>Class</li> +<li>Use</li> +<li><a href="overview-tree.html">Tree</a></li> +<li><a href="deprecated-list.html">Deprecated</a></li> +<li class="navBarCell1Rev">Index</li> +<li><a href="help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li>Prev</li> +<li>Next</li> +</ul> +<ul class="navList"> +<li><a href="index.html?index-all.html" target="_top">Frames</a></li> +<li><a href="index-all.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_bottom"> +<li><a href="allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_bottom"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<a name="skip.navbar.bottom"> +<!-- --> +</a></div> +<!-- ======== END OF BOTTOM NAVBAR ======= --> +<p class="legalCopy"><small>Copyright © 2015–2016 <a href="http://www.apache.org/";>The Apache Software Foundation</a>. 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+ } + } + catch(err) { + } +//--> +var methods = {"i0":10,"i1":10,"i2":10}; +var tabs = {65535:["t0","All Methods"],2:["t2","Instance Methods"],8:["t4","Concrete Methods"]}; +var altColor = "altColor"; +var rowColor = "rowColor"; +var tableTab = "tableTab"; +var activeTableTab = "activeTableTab"; +</script> +<noscript> +<div>JavaScript is disabled on your browser.</div> +</noscript> +<!-- ========= START OF TOP NAVBAR ======= --> +<div class="topNav"><a name="navbar.top"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.top" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.top.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/CommandLineMasterPasswordProvider.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../../index-all.html">Index</a></li> +<li><a href="../../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li>Prev Class</li> +<li><a href="../../../../org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">Next Class</span></a></li> +</ul> +<ul class="navList"> +<li><a href="../../../../index.html?org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" target="_top">Frames</a></li> +<li><a href="CommandLineMasterPasswordProvider.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_top"> +<li><a href="../../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_top"); + if(window==top) { + allClassesLink.style.display = "block"; + } + else { + allClassesLink.style.display = "none"; + } + //--> +</script> +</div> +<div> +<ul class="subNavList"> +<li>Summary: </li> +<li>Nested | </li> +<li>Field | </li> +<li><a href="#constructor.summary">Constr</a> | </li> +<li><a href="#method.summary">Method</a></li> +</ul> +<ul class="subNavList"> +<li>Detail: </li> +<li>Field | </li> +<li><a href="#constructor.detail">Constr</a> | </li> +<li><a href="#method.detail">Method</a></li> +</ul> +</div> +<a name="skip.navbar.top"> +<!-- --> +</a></div> +<!-- ========= END OF TOP NAVBAR ========= --> +<!-- ======== START OF CLASS DATA ======== --> +<div class="header"> +<div class="subTitle">org.apache.taverna.commandline</div> +<h2 title="Class CommandLineMasterPasswordProvider" class="title">Class CommandLineMasterPasswordProvider</h2> +</div> +<div class="contentContainer"> +<ul class="inheritance"> +<li><a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true"; title="class or interface in java.lang">java.lang.Object</a></li> +<li> +<ul class="inheritance"> +<li>org.apache.taverna.commandline.CommandLineMasterPasswordProvider</li> +</ul> +</li> +</ul> +<div class="description"> +<ul class="blockList"> +<li class="blockList"> +<dl> +<dt>All Implemented Interfaces:</dt> +<dd><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider</a></dd> +</dl> +<hr> +<br> +<pre>public class <span class="typeNameLabel">CommandLineMasterPasswordProvider</span> +extends <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true"; title="class or interface in java.lang">Object</a> +implements <a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider</a></pre> +<div class="block">An implementation of <a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager"><code>MasterPasswordProvider</code></a> that reads Credential Manager's + master password from stdin (pipe or terminal) is -cmpassword option is present in command + line arguments. Otherwise it tries to read it from a special file password.txt in a special + directory specified by -cmdir option, if present.</div> +<dl> +<dt><span class="simpleTagLabel">Author:</span></dt> +<dd>Alex Nenadic</dd> +</dl> +</li> +</ul> +</div> +<div class="summary"> +<ul class="blockList"> +<li class="blockList"> +<!-- ======== NESTED CLASS SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="nested.class.summary"> +<!-- --> +</a> +<h3>Nested Class Summary</h3> +<ul class="blockList"> +<li class="blockList"><a name="nested.classes.inherited.from.class.org.apache.taverna.security.credentialmanager.MasterPasswordProvider"> +<!-- --> +</a> +<h3>Nested classes/interfaces inherited from interface org.apache.taverna.security.credentialmanager.<a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider</a></h3> +<code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.ProviderComparator.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider.ProviderComparator</a></code></li> +</ul> +</li> +</ul> +<!-- ======== CONSTRUCTOR SUMMARY ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.summary"> +<!-- --> +</a> +<h3>Constructor Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation"> +<caption><span>Constructors</span><span class="tabEnd"> </span></caption> +<tr> +<th class="colOne" scope="col">Constructor and Description</th> +</tr> +<tr class="altColor"> +<td class="colOne"><code><span class="memberNameLink"><a href="../../../../org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#CommandLineMasterPasswordProvider-org.apache.taverna.commandline.options.CommandLineOptions-">CommandLineMasterPasswordProvider</a></span>(<a href="../../../../org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a> commandLineOptions)</code> </td> +</tr> +</table> +</li> +</ul> +<!-- ========== METHOD SUMMARY =========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.summary"> +<!-- --> +</a> +<h3>Method Summary</h3> +<table class="memberSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation"> +<caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> +<tr> +<th class="colFirst" scope="col">Modifier and Type</th> +<th class="colLast" scope="col">Method and Description</th> +</tr> +<tr id="i0" class="altColor"> +<td class="colFirst"><code><a href="http://docs.oracle.com/javase/7/docs/api/java/lang/String.html?is-external=true"; title="class or interface in java.lang">String</a></code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../../org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#getMasterPassword-boolean-">getMasterPassword</a></span>(boolean firstTime)</code> </td> +</tr> +<tr id="i1" class="rowColor"> +<td class="colFirst"><code>int</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../../org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#getProviderPriority--">getProviderPriority</a></span>()</code> </td> +</tr> +<tr id="i2" class="altColor"> +<td class="colFirst"><code>void</code></td> +<td class="colLast"><code><span class="memberNameLink"><a href="../../../../org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html#setMasterPassword-java.lang.String-">setMasterPassword</a></span>(<a href="http://docs.oracle.com/javase/7/docs/api/java/lang/String.html?is-external=true"; title="class or interface in java.lang">String</a> masterPassword)</code> </td> +</tr> +</table> +<ul class="blockList"> +<li class="blockList"><a name="methods.inherited.from.class.java.lang.Object"> +<!-- --> +</a> +<h3>Methods inherited from class java.lang.<a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true"; title="class or interface in java.lang">Object</a></h3> +<code><a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#clone--"; title="class or interface in java.lang">clone</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#equals-java.lang.Object-"; title="class or interface in java.lang">equals</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#finalize--"; title="class or interface in java.lang">finalize</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#getClass--"; title="class or interface in java.lang">getClass</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#hashCode--"; title="class or interface in java.lang">hashCode</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#notify--"; title="class or interface in java.lang">notify</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang /Object.html?is-external=true#notifyAll--" title="class or interface in java.lang">notifyAll</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#toString--"; title="class or interface in java.lang">toString</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#wait--"; title="class or interface in java.lang">wait</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#wait-long-"; title="class or interface in java.lang">wait</a>, <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/Object.html?is-external=true#wait-long-int-"; title="class or interface in java.lang">wait</a></code></li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +<div class="details"> +<ul class="blockList"> +<li class="blockList"> +<!-- ========= CONSTRUCTOR DETAIL ======== --> +<ul class="blockList"> +<li class="blockList"><a name="constructor.detail"> +<!-- --> +</a> +<h3>Constructor Detail</h3> +<a name="CommandLineMasterPasswordProvider-org.apache.taverna.commandline.options.CommandLineOptions-"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>CommandLineMasterPasswordProvider</h4> +<pre>public CommandLineMasterPasswordProvider(<a href="../../../../org/apache/taverna/commandline/options/CommandLineOptions.html" title="interface in org.apache.taverna.commandline.options">CommandLineOptions</a> commandLineOptions)</pre> +</li> +</ul> +</li> +</ul> +<!-- ============ METHOD DETAIL ========== --> +<ul class="blockList"> +<li class="blockList"><a name="method.detail"> +<!-- --> +</a> +<h3>Method Detail</h3> +<a name="getMasterPassword-boolean-"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>getMasterPassword</h4> +<pre>public <a href="http://docs.oracle.com/javase/7/docs/api/java/lang/String.html?is-external=true"; title="class or interface in java.lang">String</a> getMasterPassword(boolean firstTime)</pre> +<dl> +<dt><span class="overrideSpecifyLabel">Specified by:</span></dt> +<dd><code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true#getMasterPassword-boolean-"; title="class or interface in org.apache.taverna.security.credentialmanager">getMasterPassword</a></code> in interface <code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider</a></code></dd> +</dl> +</li> +</ul> +<a name="setMasterPassword-java.lang.String-"> +<!-- --> +</a> +<ul class="blockList"> +<li class="blockList"> +<h4>setMasterPassword</h4> +<pre>public void setMasterPassword(<a href="http://docs.oracle.com/javase/7/docs/api/java/lang/String.html?is-external=true"; title="class or interface in java.lang">String</a> masterPassword)</pre> +<dl> +<dt><span class="overrideSpecifyLabel">Specified by:</span></dt> +<dd><code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true#setMasterPassword-java.lang.String-"; title="class or interface in org.apache.taverna.security.credentialmanager">setMasterPassword</a></code> in interface <code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider</a></code></dd> +</dl> +</li> +</ul> +<a name="getProviderPriority--"> +<!-- --> +</a> +<ul class="blockListLast"> +<li class="blockList"> +<h4>getProviderPriority</h4> +<pre>public int getProviderPriority()</pre> +<dl> +<dt><span class="overrideSpecifyLabel">Specified by:</span></dt> +<dd><code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true#getProviderPriority--"; title="class or interface in org.apache.taverna.security.credentialmanager">getProviderPriority</a></code> in interface <code><a href="https://taverna.incubator.apache.org/javadoc/taverna-engine/org/apache/taverna/security/credentialmanager/MasterPasswordProvider.html?is-external=true"; title="class or interface in org.apache.taverna.security.credentialmanager">MasterPasswordProvider</a></code></dd> +</dl> +</li> +</ul> +</li> +</ul> +</li> +</ul> +</div> +</div> +<!-- ========= END OF CLASS DATA ========= --> +<!-- ======= START OF BOTTOM NAVBAR ====== --> +<div class="bottomNav"><a name="navbar.bottom"> +<!-- --> +</a> +<div class="skipNav"><a href="#skip.navbar.bottom" title="Skip navigation links">Skip navigation links</a></div> +<a name="navbar.bottom.firstrow"> +<!-- --> +</a> +<ul class="navList" title="Navigation"> +<li><a href="../../../../overview-summary.html">Overview</a></li> +<li><a href="package-summary.html">Package</a></li> +<li class="navBarCell1Rev">Class</li> +<li><a href="class-use/CommandLineMasterPasswordProvider.html">Use</a></li> +<li><a href="package-tree.html">Tree</a></li> +<li><a href="../../../../deprecated-list.html">Deprecated</a></li> +<li><a href="../../../../index-all.html">Index</a></li> +<li><a href="../../../../help-doc.html">Help</a></li> +</ul> +</div> +<div class="subNav"> +<ul class="navList"> +<li>Prev Class</li> +<li><a href="../../../../org/apache/taverna/commandline/CommandLineOptionsImpl.html" title="class in org.apache.taverna.commandline"><span class="typeNameLink">Next Class</span></a></li> +</ul> +<ul class="navList"> +<li><a href="../../../../index.html?org/apache/taverna/commandline/CommandLineMasterPasswordProvider.html" target="_top">Frames</a></li> +<li><a href="CommandLineMasterPasswordProvider.html" target="_top">No Frames</a></li> +</ul> +<ul class="navList" id="allclasses_navbar_bottom"> +<li><a href="../../../../allclasses-noframe.html">All Classes</a></li> +</ul> +<div> +<script type="text/javascript"><!-- + allClassesLink = document.getElementById("allclasses_navbar_bottom"); 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